The following solvent accessibility information was derived from the information in Table 2 of reference [1]. The data for this table was calculated from data taken from 55 proteins in the Brookhaven data base, coming from 9 molecular families: globi ns, immunoglobins, cytochromes c, serine proteases, subtilisins, calcium binding proteins, acid proteases, toxins and virus capsid proteins.
NOTE: These two conditions ARE NOT equivalent!
The only clear trend in this table is that some residues, such as R and K, locate themselves so that they have access to the solvent. The so-called hydrophobic residues, such as L and F, show no clear trend: they are found near the solvent as
often as they are found buried.
Amino acid | SEA > 30 Å2 | SEA < 10 Å2 | 30 > SEA > 10 Å2 |
S | 0.70 | 0.20 | 0.10 |
T | 0.71 | 0.16 | 0.13 |
A | 0.48 | 0.35 | 0.17 |
G | 0.51 | 0.36 | 0.13 |
P | 0.78 | 0.13 | 0.09 |
C | 0.32 | 0.54 | 0.14 |
D | 0.81 | 0.09 | 0.10 |
E | 0.93 | 0.04 | 0.03 |
Q | 0.81 | 0.10 | 0.09 |
N | 0.82 | 0.10 | 0.08 |
L | 0.41 | 0.49 | 0.10 |
I | 0.39 | 0.47 | 0.14 |
V | 0.40 | 0.50 | 0.10 |
M | 0.44 | 0.20 | 0.36 |
F | 0.42 | 0.42 | 0.16 |
Y | 0.67 | 0.20 | 0.13 |
W | 0.49 | 0.44 | 0.07 |
K | 0.93 | 0.02 | 0.05 |
R | 0.84 | 0.05 | 0.11 |
H | 0.66 | 0.19 | 0.15 |