Chr	ORF	Gene	Observations	Best log(e)	EC	Description
A	YAL004W	YAL004W	6	-1.4	1	Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data; completely overlaps verified gene SSA1/YAL005C [Source:SGD;Acc:S000002136]
A	YAL016C-A	YAL016C-A	0	nf	1	Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data [Source:SGD;Acc:S000028728]
A	YAL016C-B	YAL016C-B	0	nf	1	Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data [Source:SGD;Acc:S000028528]
A	YAL019W-A	YAL019W-A	14	-7.8	1	Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data [Source:SGD;Acc:S000028729]
A	YAL031W-A	YAL031W-A	2	-1.3	1	Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data [Source:SGD;Acc:S000028731]
A	YAL034C-B	YAL034C-B	0	nf	1	Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data [Source:SGD;Acc:S000002137]
A	YAL037C-B	YAL037C-B	0	nf	1	Dubious open reading frame unlikely to encode a protein; identified by gene-trapping, microarray-based expression analysis, and genome-wide homology searching [Source:SGD;Acc:S000028592]
A	YAL045C	YAL045C	0	nf	1	Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data; almost completely overlaps YAL044W-A [Source:SGD;Acc:S000000043]
A	YAL047W-A	YAL047W-A	2	-1.1	1	Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data [Source:SGD;Acc:S000028733]
A	YAL064C-A	TDA8	0	nf	1	Putative protein of unknown function; null mutant is sensitive to expression of the top1-T722A allele; not an essential gene [Source:SGD;Acc:S000002140]
A	YAL064W	YAL064W	1	-1.1	1	Protein of unknown function; may interact with ribosomes, based on co-purification experiments [Source:SGD;Acc:S000000060]
A	YAL064W-B	YAL064W-B	1	-1	1	Fungal-specific protein of unknown function [Source:SGD;Acc:S000002141]
A	YAL068C	PAU8	2	-1.1	1	Protein of unknown function, member of the seripauperin multigene family encoded mainly in subtelomeric regions [Source:SGD;Acc:S000002142]
A	YAL068W-A	YAL068W-A	0	nf	1	Dubious open reading frame unlikely to encode a protein; identified by gene-trapping, microarray-based expression analysis, and genome-wide homology searching [Source:SGD;Acc:S000028594]
A	YAL069W	YAL069W	0	nf	1	Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data [Source:SGD;Acc:S000002143]
A	YAR019W-A	YAR019W-A	2	-1.2	1	Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data [Source:SGD;Acc:S000028735]
A	YAR029W	YAR029W	0	nf	1	Member of DUP240 gene family but contains no transmembrane domains; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm in a punctate pattern [Source:SGD;Acc:S000000077]
A	YAR030C	YAR030C	0	nf	1	Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data; partially overlaps the uncharacterized ORF YAR029W and the verified gene PRM9 [Source:SGD;Acc:S000001821]
A	YAR047C	YAR047C	0	nf	1	Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data [Source:SGD;Acc:S000000083]
A	YAR064W	YAR064W	0	nf	1	Putative protein of unknown function [Source:SGD;Acc:S000000089]
A	YAR069C	YAR069C	0	nf	1	Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data [Source:SGD;Acc:S000000092]
B	YBL006W-A	YBL006W-A	2	-1.4	1	Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data; completely overlaps the verified gene LDB7/YBL006C [Source:SGD;Acc:S000028596]
B	YBL039C-A	YBL039C-A	1	-1.4	1	Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data; completely overlaps the verified ORF URA7; identified by expression profiling and mass spectrometry [Source:SGD;Acc:S000028814]
B	YBL044W	YBL044W	5	-2	1	Putative protein of unknown function; YBL044W is not an essential protein [Source:SGD;Acc:S000000140]
B	YBL048W	RRT1	5	-1.9	1	Identified in a screen for mutants with increased levels of rDNA transcription; dubious open reading frame unlikely to encode a protein, based on experimental and comparative sequence data [Source:SGD;Acc:S000000144]
B	YBL053W	YBL053W	1	-1.7	1	Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data [Source:SGD;Acc:S000000149]
B	YBL062W	YBL062W	4	-1.5	1	Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data [Source:SGD;Acc:S000000158]
B	YBL070C	YBL070C	4	-1.4	1	Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data [Source:SGD;Acc:S000000166]
B	YBL071C-B	YBL071C-B	2	-1.2	1	Putative protein of unknown function; identified by gene-trapping, microarray-based expression analysis, and genome-wide homology searching [Source:SGD;Acc:S000028597]
B	YBL083C	YBL083C	2	-1.2	1	Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data; overlaps verified ORF ALG3 [Source:SGD;Acc:S000000179]
B	YBL094C	YBL094C	3	-1.7	1	Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data; partially overlaps uncharacterized ORF YBL095W [Source:SGD;Acc:S000000190]
B	YBL100C	YBL100C	2	-1.4	1	Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data; almost completely overlaps the 5' end of ATP1 [Source:SGD;Acc:S000000196]
B	YBL100W-C	YBL100W-C	1	-1.1	1	Putative protein of unknown function; identified by gene-trapping, microarray-based expression analysis, and genome-wide homology searching [Source:SGD;Acc:S000028598]
B	YBL107W-A	YBL107W-A	2	-1.2	1	Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data; completely overlaps the Ty2 LTR YBLWdelta2 [Source:SGD;Acc:S000007229]
B	YBL108C-A	PAU9	2	-1.1	1	Protein of unknown function, member of the seripauperin multigene family encoded mainly in subtelomeric regions [Source:SGD;Acc:S000007592]
B	YBL109W	YBL109W	0	nf	1	Dubious open reading frame unlikely to encode a protein, based on experimental and comparative sequence data [Source:SGD;Acc:S000002150]
B	YBL113W-A	YBL113W-A	0	nf	1	Dubious open reading frame unlikely to encode a protein; identified by gene-trapping, microarray-based expression analysis, and genome-wide homology searching [Source:SGD;Acc:S000028599]
B	YBR012C	YBR012C	0	nf	1	Dubious open reading frame, unlikely to encode a functional protein; expression induced by iron-regulated transcriptional activator Aft2p [Source:SGD;Acc:S000000216]
B	YBR032W	YBR032W	1	-1.7	1	Dubious open reading frame unlikely to encode a protein, based on experimental and comparative sequence data [Source:SGD;Acc:S000000236]
B	YBR056C-B	YBR056C-B	2	-1.3	1	Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data; almost completely overlaps the dubious ORF YBR056W-A [Source:SGD;Acc:S000087087]
B	YBR064W	YBR064W	3	-1.6	1	Dubious open reading frame unlikely to encode a protein; partially overlaps the uncharacterized ORF YBR063C [Source:SGD;Acc:S000000268]
B	YBR076C-A	YBR076C-A	0	nf	1	Dubious open reading frame unlikely to encode a protein; partially overlaps verified gene ECM8; identified by fungal homology and RT-PCR [Source:SGD;Acc:S000028533]
B	YBR099C	YBR099C	1	-1	1	Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data; completely overlaps the verified gene MMS4 [Source:SGD;Acc:S000000303]
B	YBR103C-A	YBR103C-A	0	nf	1	Dubious open reading frame unlikely to encode a protein, based on experimental and comparative sequence data; identified by homology to related yeast [Source:SGD;Acc:S000007593]
B	YBR121C-A	YBR121C-A	1	-1.2	1	Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data; completely contianed within the verified gene GRS1; identified by expression profiling and mass spectrometry [Source:SGD;Acc:S000028815]
B	YBR126W-B	YBR126W-B	1	-1.1	1	Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data; partially overlaps the dubious ORF YBR126W-A; Identified by SAGE [Source:SGD;Acc:S000028738]
B	YBR131C-A	YBR131C-A	2	-1.3	1	Dubious ORF unlikely to encode a protein, based on available experimental and comparative sequence data; partially overlaps the verified ORF YBR131W. Identified by gene-trapping, microarray analysis, and genome-wide homology searches [Source:SGD;Acc:S000028601]
B	YBR134W	YBR134W	1	-1.1	1	Dubious open reading frame unlikely to encode a functional protein, based on available experimental and comparative sequence data [Source:SGD;Acc:S000000338]
B	YBR144C	YBR144C	7	-1.6	1	Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data; YBR144C is not an essential gene [Source:SGD;Acc:S000000348]
B	YBR174C	YBR174C	1	-1	1	Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data; partially overlaps the verified ORF YBR175W; null mutant is viable and sporulation defective [Source:SGD;Acc:S000000378]
B	YBR178W	YBR178W	1	-0.3	1	Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data; partially overlaps the verified gene YBR177C [Source:SGD;Acc:S000000382]
B	YBR182C-A	YBR182C-A	4	0	1	Putative protein of unknown function; identified by gene-trapping, microarray-based expression analysis, and genome-wide homology searching [Source:SGD;Acc:S000028603]
B	YBR200W-A	YBR200W-A	2	-1.2	1	Putative protein of unknown function; identified by fungal homology and RT-PCR [Source:SGD;Acc:S000028535]
B	YBR206W	YBR206W	2	-1.4	1	Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data; partially overlaps the verified gene KTR3 [Source:SGD;Acc:S000000410]
B	YBR221W-A	YBR221W-A	2	-1.3	1	Putative protein of unknown function; identified by expression profiling and mass spectrometry [Source:SGD;Acc:S000028817]
B	YBR223W-A	YBR223W-A	0	nf	1	Dubious ORF unlikely to encode a protein, based on available experimental and comparative sequence data; completely overlaps YBR223C; identified by gene-trapping, microarray-based expression analysis, and genome-wide homology searching [Source:SGD;Acc:S000028604]
B	YBR232C	YBR232C	0	nf	1	Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data [Source:SGD;Acc:S000000436]
B	YBR266C	SLM6	0	nf	1	Protein with a potential role in actin cytoskeleton organization; gene exhibits synthetic genetic interaction with MSS4 encoding phosphatidylinositol 4-phosphate kinase [Source:SGD;Acc:S000000470]
B	YBR277C	YBR277C	1	0	1	Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data; partially overlaps the verified gene YBR278W [Source:SGD;Acc:S000000481]
B	YBR292C	YBR292C	1	-1.3	1	Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data; YBR292C is not an essential gene [Source:SGD;Acc:S000000496]
B	YBR296C-A	YBR296C-A	0	nf	1	Putative protein of unknown function; identified by gene-trapping, microarray-based expression analysis, and genome-wide homology searching [Source:SGD;Acc:S000028605]
B	YBR300C	YBR300C	0	nf	1	Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data; partially overlaps the verified gene YBR301W; YBR300C is not an essential gene [Source:SGD;Acc:S000000504]
B	YBR301W	PAU24	2	-1.1	1	Cell wall mannoprotein with similarity to Tir1p, Tir2p, Tir3p, and Tir4p; member of the seripauperin multigene family encoded mainly in subtelomeric regions; expressed under anaerobic conditions, completely repressed during aerobic growth [Source:SGD;Acc:S000000505]
C	YCL001W-A	YCL001W-A	2	-0.1	1	Putative protein of unknown function; YCL001W-A gene has similarity to DOM34 and is present in a region duplicated between chromosomes XIV and III [Source:SGD;Acc:S000007221]
C	YCL001W-B	YCL001W-B	0	nf	1	Putative protein of unknown function; YCL001W-B gene has similarity to DOM34 and is present in a region duplicated between chromosomes XIV and III [Source:SGD;Acc:S000007596]
C	YCL007C	YCL007C	0	nf	1	Dubious ORF unlikely to encode a protein; overlaps verified ORF YCL005W-A; mutations in YCL007C were thought to confer sensitivity to calcofluor white, but this phenotype was later shown to be due to the defect in YCL005W-A [Source:SGD;Acc:S000000513]
C	YCL022C	YCL022C	0	nf	1	Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data; completely overlaps verified gene KCC4/YCL024W [Source:SGD;Acc:S000000527]
C	YCL023C	YCL023C	2	-1.8	1	Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data; partially overlaps verified ORF KCC4 [Source:SGD;Acc:S000000528]
C	YCL041C	YCL041C	1	-1.2	1	Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data; partially overlaps both the verified gene PDI1/YCL043C and the uncharacterized gene YCL042W [Source:SGD;Acc:S000000546]
C	YCL048W-A	YCL048W-A	0	nf	1	Putative protein of unknown function [Source:SGD;Acc:S000087203]
C	YCL058C	FYV5	3	0	1	Protein involved in regulation of the mating pathway; binds with Matalpha2p to promoters of haploid-specific genes; required for survival upon exposure to K1 killer toxin; involved in ion homeostasis [Source:SGD;Acc:S000000563]
C	YCL065W	YCL065W	0	nf	1	Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data; overlaps HMLALPHA1 [Source:SGD;Acc:S000000570]
C	YCL066W	HMLALPHA1	3	-1.2	1	Silenced copy of ALPHA1 at HML, encoding a transcriptional coactivator involved in the regulation of mating-type alpha-specific gene expression [Source:SGD;Acc:S000000571]
C	YCR018C-A	YCR018C-A	0	nf	1	Putative protein of unknown function; encoded opposite a Ty1 LTR [Source:SGD;Acc:S000007230]
C	YCR022C	YCR022C	15	-1.9	1	Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data; YCR022C is not an essential gene [Source:SGD;Acc:S000000616]
C	YCR024C-A	PMP1	0	nf	1	Small single-membrane span proteolipid that functions as a regulatory subunit of the plasma membrane H(+)-ATPase Pma1p, forms unique helix and positively charged cytoplasmic domain that is able to specifically segregate phosphatidylserines [Source:SGD;Acc:S000000619]
C	YCR024C-B	YCR024C-B	1	-1.4	1	Putative protein of unknown function; identified by expression profiling and mass spectrometry [Source:SGD;Acc:S000028818]
C	YCR038W-A	YCR038W-A	0	nf	1	Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data; completely overlaps the verified gene BUD5/YCR038C; identified by homology with hemiascomycetous yeast species [Source:SGD;Acc:S000007597]
C	YCR040W	MATALPHA1	3	-1.2	1	Transcriptional co-activator involved in regulation of mating-type-specific gene expression; targets the transcription factor Mcm1p to the promoters of alpha-specific genes; one of two genes encoded by the MATalpha mating type cassette [Source:SGD;Acc:S000000636]
C	YCR041W	YCR041W	0	nf	1	Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data [Source:SGD;Acc:S000000637]
C	YCR047W-A	YCR047W-A	2	-1.6	1	Dubious ORF unlikely to encode a protein, based on available experimental and comparative sequence data; completely overlaps with YCR047C; identified by gene-trapping, microarray expression analysis, and genome-wide homology searching [Source:SGD;Acc:S000028608]
C	YCR050C	YCR050C	1	-1.4	1	Non-essential protein of unknown function; deletion mutant is synthetically sick or lethal with alpha-synuclein [Source:SGD;Acc:S000000646]
C	YCR064C	YCR064C	3	-1.6	1	Dubious open reading frame unlikely to encode a protein, based on experimental and comparative sequence data; partially overlaps the verified gene BUD31 [Source:SGD;Acc:S000000660]
C	YCR081C-A	YCR081C-A	1	-1.1	1	Dubious ORF unlikely to encode a protein, based on available experimental and comparative sequence data; completely overlaps with SRB8/YCR081W; identified by gene-trapping, microarray expression analysis, and genome-wide homology searching [Source:SGD;Acc:S000028609]
C	YCR087W	YCR087W	8	-10	1	Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data; partially overlaps uncharacterized gene YCR087C-A; YCR087W is not an essential gene [Source:SGD;Acc:S000000683]
C	YCR097W-A	YCR097W-A	0	nf	1	Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data; identified by homology to a hemiascomycetous yeast protein [Source:SGD;Acc:S000007632]
C	YCR108C	YCR108C	4	-1.4	1	Putative protein of unknown function; identified by fungal homology and RT-PCR [Source:SGD;Acc:S000028536]
D	YDL011C	YDL011C	3	-1.2	1	Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data; overlaps the uncharacterized ORF YDL010W [Source:SGD;Acc:S000002169]
D	YDL025W-A	YDL025W-A	0	nf	1	Dubious ORF unlikely to encode a protein, based on available experimental and comparative sequence data; completely overlaps the ORF YDL025C; identified by gene-trapping, microarray expression analysis, and genome-wide homology searching [Source:SGD;Acc:S000028610]
D	YDL026W	YDL026W	0	nf	1	Dubious ORF unlikely to encode a protein, based on available experimental and comparative sequence data [Source:SGD;Acc:S000002184]
D	YDL034W	YDL034W	1	-1.3	1	Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data; partially overlaps with verified gene GPR1/YDL035C; YDL034W is not an essential gene [Source:SGD;Acc:S000002192]
D	YDL037C	BSC1	6	-1.8	1	Protein of unconfirmed function, similar to cell surface flocculin Muc1p; ORF exhibits genomic organization compatible with a translational readthrough-dependent mode of expression [Source:SGD;Acc:S000002195]
D	YDL050C	YDL050C	5	-1.7	1	Dubious ORF unlikely to encode a protein, based on available experimental and comparative sequence data [Source:SGD;Acc:S000002208]
D	YDL086C-A	YDL086C-A	2	-1.3	1	Dubious ORF unlikely to encode a protein, based on available experimental and comparative sequence data; overlaps uncharacterized ORF YDL086W; identified by gene-trapping, microarray expression analysis, and genome-wide homology searching [Source:SGD;Acc:S000028611]
D	YDL114W	YDL114W	8	-9.5	1	Putative protein of unknown function with similarity to acyl-carrier-protein reductases; YDL114W is not an essential gene [Source:SGD;Acc:S000002272]
D	YDL114W-A	YDL114W-A	0	nf	1	Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data; identified based on homology to hemiascomycetous yeasts [Source:SGD;Acc:S000007598]
D	YDL118W	YDL118W	3	-1.2	1	Non-essential protein of unconfirmed function; mutants are defective in telomere maintenance, and are synthetically sick or lethal with alpha-synuclein [Source:SGD;Acc:S000002276]
D	YDL133C-A	RPL41B	0	nf	1	Ribosomal protein L47 of the large (60S) ribosomal subunit, identical to Rpl41Ap and has similarity to rat L41 ribosomal protein; comprised of only 25 amino acids; rpl41a rpl41b double null mutant is viable [Source:SGD;Acc:S000002293]
D	YDL152W	YDL152W	0	nf	1	Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data; partially overlaps the verified ORF SAS10/YDL153C, a component of the small ribosomal subunit processosome [Source:SGD;Acc:S000002311]
D	YDL158C	YDL158C	2	-1	1	Dubious ORF unlikely to encode a protein, based on available experimental and comparative sequence data [Source:SGD;Acc:S000002317]
D	YDL159C-B	YDL159C-B	0	nf	1	Putative protein of unknown function; identified by gene-trapping, microarray-based expression analysis, and genome-wide homology searching [Source:SGD;Acc:S000028612]
D	YDL159W-A	YDL159W-A	0	nf	1	Putative protein of unknown function; identified by sequence comparison with hemiascomycetous yeast species [Source:SGD;Acc:S000007599]
D	YDL163W	YDL163W	1	-1.3	1	Dubious open reading frame unlikely to encode a protein, based on experimental and comparative sequence data; partially overlaps the verified gene CDC9/YDL164C encoding DNA ligase [Source:SGD;Acc:S000002322]
D	YDL184C	RPL41A	0	nf	1	Ribosomal protein L47 of the large (60S) ribosomal subunit, identical to Rpl41Bp and has similarity to rat L41 ribosomal protein; comprised of only 25 amino acids; rpl41a rpl41b double null mutant is viable [Source:SGD;Acc:S000002343]
D	YDL185C-A	YDL185C-A	2	-1.4	1	Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data; partially overlaps the verified gene YDL185W; identified by homology with hemiascomycetous yeast species [Source:SGD;Acc:S000007600]
D	YDL187C	YDL187C	0	nf	1	Dubious ORF unlikely to encode a functional protein, based on available experimental and comparative sequence data [Source:SGD;Acc:S000002346]
D	YDL196W	YDL196W	0	nf	1	Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data; open reading frame is located in promoter region of essential gene SEC31 [Source:SGD;Acc:S000002355]
D	YDL221W	YDL221W	3	-1.8	1	Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data; partially overlaps the 3' end of essential gene CDC13 [Source:SGD;Acc:S000002380]
D	YDL228C	YDL228C	3	-1.5	1	Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data; almost completely overlaps the verified gene SSB1 [Source:SGD;Acc:S000002387]
D	YDL240C-A	YDL240C-A	0	nf	1	Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data; identified by sequence comparison with hemiascomycetous yeast species [Source:SGD;Acc:S000007601]
D	YDL247W-A	YDL247W-A	1	-1.1	1	Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data; identified by sequence comparison with hemiascomycetous yeast species [Source:SGD;Acc:S000007602]
D	YDR003W-A	YDR003W-A	0	nf	1	Putative protein of unknown function; identified by expression profiling and mass spectrometry [Source:SGD;Acc:S000028819]
D	YDR034C-A	YDR034C-A	0	nf	1	Putative protein of unknown function; contained within the solo Ty1 LTR element YDRWdelta7 [Source:SGD;Acc:S000007233]
D	YDR042C	YDR042C	7	-1.6	1	Putative protein of unknown function; expression is increased in ssu72-ts69 mutant [Source:SGD;Acc:S000002449]
D	YDR048C	YDR048C	3	-2	1	Dubious ORF unlikely to encode a functional protein, based on available experimental and comparative sequence data [Source:SGD;Acc:S000002455]
D	YDR053W	YDR053W	0	nf	1	Putative protein of unknown function; open reading frame overlaps 5' end of essential DBF4 gene encoding the regulatory subunit of the Cdc7p-Dbf4p kinase complex [Source:SGD;Acc:S000002460]
D	YDR094W	YDR094W	0	nf	1	Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data; partially overlaps verified ORF DNF2 [Source:SGD;Acc:S000002501]
D	YDR114C	YDR114C	3	-1.2	1	Putative protein of unknown function; deletion mutant exhibits poor growth at elevated pH and calcium [Source:SGD;Acc:S000002521]
D	YDR118W-A	YDR118W-A	1	0	1	Dubious open reading frame; identified using a combination of expression profiling and mass spectrometry [Source:SGD;Acc:S000028820]
D	YDR149C	YDR149C	3	-1.2	1	Dubious open reading frame unlikely to encode a functional protein, based on available experimental and comparative sequence data; overlaps the verified gene NUM1; null mutation blocks anaerobic growth [Source:SGD;Acc:S000002556]
D	YDR157W	YDR157W	3	-1.7	1	Dubious open reading frame unlikely to encode a functional protein, based on available experimental and comparative sequence data [Source:SGD;Acc:S000002564]
D	YDR169C-A	YDR169C-A	5	-1.4	1	Putative protein of unknown function; identified by fungal homology and RT-PCR [Source:SGD;Acc:S000028538]
D	YDR183C-A	YDR183C-A	3	-1.3	1	Dubious open reading frame unlikely to encode a functional protein; identified by fungal homology and RT-PCR [Source:SGD;Acc:S000028540]
D	YDR187C	YDR187C	0	nf	1	Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data; partially overlaps the verified, essential ORF CCT6/YDR188W [Source:SGD;Acc:S000002595]
D	YDR199W	YDR199W	2	-1.7	1	Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data; partially overlaps the verified gene VPS64; computationally predicted to have thiol-disulfide oxidoreductase activity [Source:SGD;Acc:S000002607]
D	YDR203W	YDR203W	0	nf	1	Dubious open reading frame unlikely to encode a functional protein, based on available experimental and comparative sequence data [Source:SGD;Acc:S000002611]
D	YDR215C	YDR215C	2	-1.9	1	Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data; null mutant displays elevated sensitivity to expression of a mutant huntingtin fragment or of alpha-synuclein [Source:SGD;Acc:S000002623]
D	YDR220C	YDR220C	0	nf	1	Dubious open reading frame, null mutant exhibits synthetic phenotype with alpha-synuclein [Source:SGD;Acc:S000002628]
D	YDR230W	YDR230W	8	-1.2	1	Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data; partially overlaps the verified gene COX20 [Source:SGD;Acc:S000002638]
D	YDR246W-A	YDR246W-A	1	-1.5	1	Putative protein of unknown function; identified by fungal homology and RT-PCR [Source:SGD;Acc:S000028542]
D	YDR250C	YDR250C	1	-1.4	1	Dubious open reading frame unlikely to encode a protein, based on experimental and comparative sequence data [Source:SGD;Acc:S000002658]
D	YDR269C	YDR269C	0	nf	1	Dubious open reading frame unlikely to encode a functional protein, based on available experimental and comparative sequence data [Source:SGD;Acc:S000002677]
D	YDR271C	YDR271C	6	-1.8	1	Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data; partially overlaps the verified ORF CCC2/YDR270W [Source:SGD;Acc:S000002679]
D	YDR274C	YDR274C	3	-1.4	1	Dubious open reading frame unlikely to encode a functional protein, based on available experimental and comparative sequence data [Source:SGD;Acc:S000002682]
D	YDR278C	YDR278C	3	-1.7	1	Dubious open reading frame unlikely to encode a functional protein, based on available experimental and comparative sequence data [Source:SGD;Acc:S000002686]
D	YDR320W-B	YDR320W-B	0	nf	1	Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data; overlaps the verified gene DAD4/YDR320C-A [Source:SGD;Acc:S000028821]
D	YDR344C	YDR344C	0	nf	1	Dubious open reading frame unlikely to encode a functional protein, based on available experimental and comparative sequence data [Source:SGD;Acc:S000002752]
D	YDR354C-A	YDR354C-A	8	-1.8	1	Dubious open reading frame unlikely to encode a protein, based on experimental and comparative sequence data; completely overlaps TRP4; identified by gene-trapping, microarray-based expression analysis, and genome-wide homology searching [Source:SGD;Acc:S000028613]
D	YDR355C	YDR355C	2	-1.5	1	Dubious: Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data; partially overlaps the verified essential ORF SPC110/YDR356W [Source:SGD;Acc:S000002763]
D	YDR396W	YDR396W	2	-1.8	1	Dubious open reading frame unlikely to encode a functional protein; extensively overlaps essential NCB2 gene encoding the beta subunit of the NC2 dimeric histone-fold complex [Source:SGD;Acc:S000002804]
D	YDR401W	YDR401W	6	-1.9	1	Dubious open reading frame unlikely to encode a functional protein, based on available experimental and comparative sequence data [Source:SGD;Acc:S000002809]
D	YDR406W-A	YDR406W-A	1	-1.4	1	Dubious open reading frame unlikely to encode a functional protein; identified by fungal homology and RT-PCR [Source:SGD;Acc:S000028543]
D	YDR413C	YDR413C	0	nf	1	Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data; overlaps the essential uncharacterized ORF YDR412W that is implicated in rRNA processing [Source:SGD;Acc:S000002821]
D	YDR417C	YDR417C	0	nf	1	Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data; partially overlaps the verified ORF RPL12B/YDR418W [Source:SGD;Acc:S000002825]
D	YDR426C	YDR426C	0	nf	1	Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data; partially overlaps the verified ORF SNX41 [Source:SGD;Acc:S000002834]
D	YDR431W	YDR431W	1	-1	1	Dubious ORF unlikely to encode a functional protein, based on available experimental and comparative sequence data [Source:SGD;Acc:S000002839]
D	YDR433W	YDR433W	0	nf	1	Dubious open reading frame unlikely to encode a functional protein, based on available experimental and comparative sequence data [Source:SGD;Acc:S000002841]
D	YDR442W	YDR442W	1	0	1	Dubious open reading frame unlikely to encode a functional protein, based on available experimental and comparative sequence data [Source:SGD;Acc:S000002850]
D	YDR467C	YDR467C	1	-1.2	1	Dubious open reading frame unlikely to encode a functional protein, based on available experimental and comparative sequence data [Source:SGD;Acc:S000002875]
D	YDR491C	YDR491C	3	-1.4	1	Dubious open reading frame unlikely to encode a functional protein, based on available experimental and comparative sequence data [Source:SGD;Acc:S000002899]
D	YDR504C	SPG3	0	nf	1	Protein required for survival at high temperature during stationary phase; not required for growth on nonfermentable carbon sources [Source:SGD;Acc:S000002912]
D	YDR509W	YDR509W	3	-1.6	1	Dubious open reading frame unlikely to encode a functional protein, based on available experimental and comparative sequence data [Source:SGD;Acc:S000002917]
D	YDR510C-A	YDR510C-A	0	nf	1	Dubious open reading frame unlikely to encode a functional protein; identified by gene-trapping, microarray-based expression analysis, and genome-wide homology searching [Source:SGD;Acc:S000028615]
D	YDR521W	YDR521W	0	nf	1	Dubious ORF that overlaps YDR520C; mutant increases expression of PIS1 and RPL3 in glycerol [Source:SGD;Acc:S000002929]
D	YDR524C-A	YDR524C-A	1	-1.1	1	Dubious open reading frame unlikely to encode a functional protein; identified by gene-trapping, microarray-based expression analysis, and genome-wide homology searching [Source:SGD;Acc:S000028616]
D	YDR524W-C	YDR524W-C	0	nf	1	Putative protein of unknown function; small ORF identified by SAGE; deletion strains are moderately sensitive to the radiomimetic drug bleomycin [Source:SGD;Acc:S000028740]
D	YDR526C	YDR526C	0	nf	1	Dubious open reading frame unlikely to encode a functional protein, based on available experimental and comparative sequence data [Source:SGD;Acc:S000002934]
D	YDR542W	PAU10	5	-1.1	1	Protein of unknown function, member of the seripauperin multigene family encoded mainly in subtelomeric regions [Source:SGD;Acc:S000002950]
D	YDR543C	YDR543C	1	-1.6	1	Dubious open reading frame unlikely to encode a functional protein, based on available experimental and comparative sequence data [Source:SGD;Acc:S000002951]
D	YDR544C	YDR544C	1	-1.4	1	Dubious open reading frame unlikely to encode a functional protein, based on available experimental and comparative sequence data [Source:SGD;Acc:S000002952]
D	YDR545C-A	YDR545C-A	1	-1.8	1	Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data; completely overlaps the verified ORF YRF1-1/YDR545W [Source:SGD;Acc:S000028617]
E	YEL008C-A	YEL008C-A	1	-1.4	1	Identified by gene-trapping, microarray-based expression analysis, and genome-wide homology searching [Source:SGD;Acc:S000028618]
E	YEL008W	YEL008W	1	0	1	Hypothetical protein predicted to be involved in metabolism [Source:SGD;Acc:S000000734]
E	YEL010W	YEL010W	0	nf	1	Dubious open reading frame unlikely to encode a functional protein, based on available experimental and comparative sequence data [Source:SGD;Acc:S000000736]
E	YEL014C	YEL014C	2	-0.9	1	Dubious open reading frame unlikely to encode a functional protein, based on available experimental and comparative sequence data [Source:SGD;Acc:S000000740]
E	YEL020C-B	YEL020C-B	0	nf	1	Dubious open reading frame unlikely to encode a protein; partially overlaps verified gene YEL020W-A; identified by fungal homology and RT-PCR [Source:SGD;Acc:S000028544]
E	YEL030C-A	YEL030C-A	2	-1.2	1	Identified by gene-trapping, microarray-based expression analysis, and genome-wide homology searching [Source:SGD;Acc:S000028619]
E	YEL032C-A	YEL032C-A	0	nf	1	Identified by gene-trapping, microarray-based expression analysis, and genome-wide homology searching [Source:SGD;Acc:S000028620]
E	YEL033W	MTC7	4	-1.1	1	Predicted metabolic role based on network analysis derived from ChIP experiments, a large-scale deletion study and localization of transcription factor binding sites; null mutant is sensitive to temperature oscillation in a cdc13-1 mutant [Source:SGD;Acc:S000000759]
E	YEL034C-A	YEL034C-A	0	nf	1	Dubious open reading frame unlikely to encode a protein, based on experimental and comparative sequence data; completely overlaps HYP2/YEL034W, a verified gene that encodes eiF-5A [Source:SGD;Acc:S000028743]
E	YEL035C	UTR5	6	-1.4	1	Protein of unknown function; transcription may be regulated by Gcr1p; essential for growth under standard (aerobic) conditions but not under anaerobic conditions [Source:SGD;Acc:S000000761]
E	YEL045C	YEL045C	6	-1.9	1	Dubious open reading frame unlikely to encode a protein based on available experimental and comparative sequence data; deletion gives MMS sensitivity, growth defect under alkaline conditions, less than optimal growth upon citric acid stress [Source:SGD;Acc:S000000771]
E	YEL049W	PAU2	2	-1.1	1	Member of the seripauperin multigene family encoded mainly in subtelomeric regions, active during alcoholic fermentation, regulated by anaerobiosis, negatively regulated by oxygen, repressed by heme [Source:SGD;Acc:S000000775]
E	YEL050W-A	YEL050W-A	2	-1.4	1	Dubious open reading frame unlikely to encode a functional protein; identified by fungal homology and RT-PCR [Source:SGD;Acc:S000028545]
E	YEL053W-A	YEL053W-A	0	nf	1	Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data; partially overlaps the verified gene YEL054C [Source:SGD;Acc:S000028744]
E	YEL057C	YEL057C	8	-1.9	1	Protein of unknown function involved in telomere maintenance; target of UME6 regulation [Source:SGD;Acc:S000000783]
E	YEL059W	HHY1	1	-1	1	Dubious open reading frame unlikely to encode a functional protein; mutant is hypersensitive to hygromycin B indicative of defects in vacuolar trafficking [Source:SGD;Acc:S000000785]
E	YEL074W	YEL074W	1	-0.2	1	Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data; large scale expression analysis showed an increase in mRNA accumulation in strains mutant for exosome components. [Source:SGD;Acc:S000000800]
E	YEL077W-A	YEL077W-A	1	-1.8	1	Dubious open reading frame, unlike to encode a functional protein; identified by gene-trapping, microarray-based expression analysis, and genome-wide homology searching [Source:SGD;Acc:S000028621]
E	YER006C-A	YER006C-A	2	-1.1	1	Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data; partially overlaps the verified ORF PAC2 [Source:SGD;Acc:S000028745]
E	YER014C-A	BUD25	1	-1.1	1	Protein involved in bud-site selection; diploid mutants display a random budding pattern instead of the wild-type bipolar pattern [Source:SGD;Acc:S000007590]
E	YER023C-A	YER023C-A	0	nf	1	Dubious ORF unlikely to encode a protein, based on available experimental and comparative sequence data; completely overlaps verified gene PRO3; identified by gene-trapping, microarray expression analysis, and genome-wide homology searching [Source:SGD;Acc:S000028622]
E	YER038W-A	YER038W-A	3	-2	1	Dubious open reading frame, unlikely to encode a protein; not conserved in closely related Saccharomyces species; 99% of ORF overlaps the verified gene HVG1; protein product detected in mitochondria [Source:SGD;Acc:S000028746]
E	YER067C-A	YER067C-A	9	-1	1	Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data; partially overlaps the uncharacterized ORF YER067W [Source:SGD;Acc:S000028748]
E	YER068C-A	YER068C-A	1	-1.7	1	Dubious open reading frame unlikely to encode a functional protein, based on available experimental and comparative sequence data [Source:SGD;Acc:S000028749]
E	YER076W-A	YER076W-A	0	nf	1	Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data; partially overlaps the uncharacterized ORF YER076C [Source:SGD;Acc:S000028750]
E	YER078W-A	YER078W-A	1	-1.3	1	Putative protein of unknown function; identified by fungal homology and RT-PCR [Source:SGD;Acc:S000028546]
E	YER085C	YER085C	3	-1	1	Putative protein of unknown function [Source:SGD;Acc:S000000887]
E	YER087C-A	YER087C-A	0	nf	1	Dubious open reading frame unlikely to encode a protein, based on experimental and comparative sequence data; overlaps the uncharacterized gene YER087W, a putative tRNA synthetase [Source:SGD;Acc:S000028753]
E	YER088W-B	YER088W-B	1	-1.4	1	Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data; partially overlaps the ORF PTC2/YER089C; identified by gene-trapping, expression analysis, and homology searching [Source:SGD;Acc:S000028623]
E	YER090C-A	YER090C-A	5	-1.1	1	Dubious open reading frame unlikely to encode a functional protein, based on available experimental and comparative sequence data [Source:SGD;Acc:S000029725]
E	YER107W-A	YER107W-A	6	-1.8	1	Dubious open reading frame unlikely to encode a protein, partially overlaps verified ORF GLE2/YER107C [Source:SGD;Acc:S000028755]
E	YER119C-A	YER119C-A	0	nf	1	Dubious open reading frame, not conserved in closely related Saccharomyces species; deletion mutation blocks replication of Brome mosaic virus in S. cerevisiae, but this is likely due to effects on the overlapping gene SCS2 [Source:SGD;Acc:S000002961]
E	YER133W-A	YER133W-A	1	-1.9	1	Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data; partially overlaps uncharacterized gene YER134C. [Source:SGD;Acc:S000028756]
E	YER135C	YER135C	1	-1.2	1	Dubious open reading frame unlikely to encode a protein; YER135C is not an essential gene [Source:SGD;Acc:S000000937]
E	YER138W-A	YER138W-A	4	-1.3	1	Putative protein of unknown function [Source:SGD;Acc:S000007239]
E	YER147C-A	YER147C-A	5	-1.7	1	Dubious open reading frame unlikely to encode a functional protein, based on available experimental and comparative sequence data [Source:SGD;Acc:S000028759]
E	YER148W-A	YER148W-A	2	-1.6	1	Dubious open reading frame unlikely to encode a functional protein, based on available experimental and comparative sequence data [Source:SGD;Acc:S000028760]
E	YER165C-A	YER165C-A	1	-1.2	1	Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data; overlaps the verified gene DNF1/YER166W [Source:SGD;Acc:S000028762]
E	YER172C-A	YER172C-A	4	-1.4	1	Dubious open reading frame unlikely to encode a functional protein, based on available experimental and comparative sequence data [Source:SGD;Acc:S000028763]
E	YER188C-A	YER188C-A	0	nf	1	Putative protein of unknown function [Source:SGD;Acc:S000028764]
E	YER190C-B	YER190C-B	1	-1.8	1	Putative protein of unknown function; identified by gene-trapping, microarray-based expression analysis, and genome-wide homology searching [Source:SGD;Acc:S000028627]
F	YFL010W-A	AUA1	1	-1.4	1	Protein required for the negative regulation by ammonia of Gap1p, which is a general amino acid permease [Source:SGD;Acc:S000001955]
F	YFL015C	YFL015C	1	-1.2	1	Dubious open reading frame unlikely to encode a protein; partially overlaps dubious ORF YFL015W-A; YFL015C is not an essential gene [Source:SGD;Acc:S000001879]
F	YFL031C-A	YFL031C-A	3	-1.4	1	Dubious ORF unlikely to encode a protein, based on available experimental and comparative sequence data; partially overlaps HAC1/YFL031W; identified by gene-trapping, microarray-based expression analysis, and genome-wide homology searching [Source:SGD;Acc:S000028629]
F	YFL032W	YFL032W	0	nf	1	Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data; partially overlaps the verified gene HAC1/YFL031W; YFL032W is not an essential gene [Source:SGD;Acc:S000001862]
F	YFL041W-A	YFL041W-A	3	-1.5	1	Putative protein of unknown function; identified by fungal homology and RT-PCR [Source:SGD;Acc:S000028547]
F	YFL051C	YFL051C	0	nf	1	Putative protein of unknown function; YFL051C is not an essential gene [Source:SGD;Acc:S000001843]
F	YFL063W	YFL063W	0	nf	1	Dubious open reading frame, based on available experimental and comparative sequence data [Source:SGD;Acc:S000001831]
F	YFL068W	YFL068W	43	-1.6	1	Putative protein of unknown function [Source:SGD;Acc:S000001826]
F	YFR009W-A	YFR009W-A	3	-1.8	1	Dubious ORF unlikely to encode a protein, based on available experimental and comparative sequence data; completely overlaps the verified gene YFR009W; identified by expression profiling and mass spectrometry [Source:SGD;Acc:S000028823]
F	YFR012W	DCV1	4	-1.6	1	Protein of unknown function; deletion mutant shows strong genetic interaction with cdc28-as1 mutant in the presence of 1-NM-PP1 [Source:SGD;Acc:S000001908]
F	YFR012W-A	YFR012W-A	0	nf	1	Putative protein of unknown function; identified by homology [Source:SGD;Acc:S000007606]
F	YFR032C	RRT5	2	-1.1	1	Putative protein of unknown function; non-essential gene identified in a screen for mutants with increased levels of rDNA transcription; expressed at high levels during sporulation [Source:SGD;Acc:S000001928]
F	YFR032C-B	YFR032C-B	1	-1.2	1	Putative protein of unknown function; identified by gene-trapping, microarray-based expression analysis, and genome-wide homology searching [Source:SGD;Acc:S000028630]
F	YFR034W-A	YFR034W-A	0	nf	1	Dubious ORF unlikely to encode a protein, based on available experimental and comparative sequence data; partially overlaps YFR035C; identified by gene-trapping, microarray expression analysis, and genome-wide homology searching [Source:SGD;Acc:S000028631]
F	YFR035C	YFR035C	4	-1.4	1	Putative protein of unknown function, deletion mutant exhibits synthetic phenotype with alpha-synuclein [Source:SGD;Acc:S000001931]
F	YFR036W-A	YFR036W-A	0	nf	1	Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data; partially overlaps the verified gene RSC8 [Source:SGD;Acc:S000028767]
F	YFR056C	YFR056C	0	nf	1	Dubious open reading frame unlikely to encode a protein based on available experimental and comparative sequence data; partially overlaps the uncharacterized gene YFR055W [Source:SGD;Acc:S000001951]
F	YFR057W	YFR057W	0	nf	1	Putative protein of unknown function [Source:SGD;Acc:S000001953]
G	YGL006W-A	YGL006W-A	0	nf	1	Putative protein of unknown function; identified by SAGE [Source:SGD;Acc:S000028769]
G	YGL007C-A	YGL007C-A	1	-1.5	1	Putative protein of unknown function, identified by gene-trapping, microarray-based expression analysis, and genome-wide homology searching; deletion exhibits slow-growth phenotype; computationally predicted to have a role in cell budding [Source:SGD;Acc:S000028632]
G	YGL014C-A	YGL014C-A	0	nf	1	Dubious open reading frame, unlikely to encode a functional protein; identified by expression profiling and mass spectrometry [Source:SGD;Acc:S000028825]
G	YGL041C	YGL041C	0	nf	1	Dubious open reading frame unlikely to encode a functional protein, based on available experimental and comparative sequence data [Source:SGD;Acc:S000003009]
G	YGL041C-B	YGL041C-B	1	-1.2	1	Putative protein of unknown function; identified by fungal homology and RT-PCR [Source:SGD;Acc:S000028548]
G	YGL042C	YGL042C	0	nf	1	Dubious open reading frame, not conserved in closely related Saccharomyces species; deletion mutation blocks replication of Brome mosaic virus in S. cerevisiae, but this is likely due to effects on the overlapping gene DST1 [Source:SGD;Acc:S000003010]
G	YGL063C-A	YGL063C-A	2	-1.8	1	Dubious open reading frame unlikely to encode a functional protein; identified by gene-trapping, microarray-based expression analysis, and genome-wide homology searching [Source:SGD;Acc:S000028633]
G	YGL072C	YGL072C	3	-1.4	1	Dubious open reading frame unlikely to encode a protein; partially overlaps the verified gene HSF1; null mutant displays increased resistance to antifungal agents gliotoxin, cycloheximide and H2O2 [Source:SGD;Acc:S000003040]
G	YGL088W	YGL088W	0	nf	1	Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data; partially overlaps snR10, a snoRNA required for preRNA processing [Source:SGD;Acc:S000003056]
G	YGL102C	YGL102C	0	nf	1	Dubious open reading frame unlikely to encode a functional protein; overlaps 3' end of essential RPL28 gene encoding a large subunit ribosomal protein [Source:SGD;Acc:S000003070]
G	YGL109W	YGL109W	2	-1.1	1	Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data; overlaps the uncharacterized gene YGL108C [Source:SGD;Acc:S000003077]
G	YGL123C-A	YGL123C-A	1	-1.1	1	Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data; overlaps the verified gene RPS2/YGL123W [Source:SGD;Acc:S000028634]
G	YGL132W	YGL132W	2	-1.1	1	Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data; overlaps the verified gene SNT2/YGL131C [Source:SGD;Acc:S000003100]
G	YGL149W	YGL149W	2	-1.2	1	Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data; partially overlaps the verified ORF INO80/YGL150C. [Source:SGD;Acc:S000003117]
G	YGL168W	HUR1	0	nf	1	Protein of unknown function; reported null mutant phenotype of hydroxyurea sensitivity may be due to effects on overlapping PMR1 gene [Source:SGD;Acc:S000003136]
G	YGL177W	YGL177W	0	nf	1	Dubious open reading frame unlikely to encode a functional protein, based on available experimental and comparative sequence data [Source:SGD;Acc:S000003145]
G	YGL182C	YGL182C	5	-1.8	1	Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data; partially overlaps the verified ORF MND1/YGL183C [Source:SGD;Acc:S000003150]
G	YGL188C	YGL188C	0	nf	1	Dubious open reading frame unlikely to encode a functional protein, based on available experimental and comparative sequence data [Source:SGD;Acc:S000003156]
G	YGL188C-A	YGL188C-A	0	nf	1	Putative protein of unknown function [Source:SGD;Acc:S000028635]
G	YGL199C	YGL199C	4	-1.2	1	Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data; partially overlaps the verified ORF YIP4/YGL198W [Source:SGD;Acc:S000003167]
G	YGL261C	PAU11	2	-1.1	1	Putative protein of unknown function and member of the seripauperin multigene family encoded mainly in subtelomeric regions; mRNA expression appears to be regulated by SUT1 and UPC2 [Source:SGD;Acc:S000003230]
G	YGL262W	YGL262W	4	-1.8	1	Putative protein of unknown function; null mutant displays elevated sensitivity to expression of a mutant huntingtin fragment or of alpha-synuclein; YGL262W is not an essential gene [Source:SGD;Acc:S000003231]
G	YGR018C	YGR018C	0	nf	1	Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data; partially overlaps the uncharacterized ORF YGR017W [Source:SGD;Acc:S000003250]
G	YGR022C	YGR022C	2	-1.2	1	Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data; overlaps almost completely with the verified ORF MTL1/YGR023W [Source:SGD;Acc:S000003254]
G	YGR031C-A	NAG1	2	-1.6	1	Protein involved in yeast cell wall biogenesis; localizes to the cell periphery; production of Nag1p is dependent upon the presence of Slt2p and Rlm1p; gene is nested within and antisense to IMO32 [Source:SGD;Acc:S000028636]
G	YGR039W	YGR039W	0	nf	1	Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data; partially overlaps the Autonomously Replicating Sequence ARS722 [Source:SGD;Acc:S000003271]
G	YGR051C	YGR051C	0	nf	1	Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data; YGR051C is not an essential gene [Source:SGD;Acc:S000003283]
G	YGR064W	YGR064W	1	-1.2	1	Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data; partially overlaps the verified ORF SPT4/YGR063C [Source:SGD;Acc:S000003296]
G	YGR068W-A	YGR068W-A	0	nf	1	Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data; completely overlaps with the uncharacterized ORF YGR068C [Source:SGD;Acc:S000028637]
G	YGR069W	YGR069W	2	-1.3	1	Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data [Source:SGD;Acc:S000003301]
G	YGR107W	YGR107W	3	-1.3	1	Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data [Source:SGD;Acc:S000003339]
G	YGR114C	YGR114C	0	nf	1	Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data; open reading frame overlaps 5' end of the essential gene SPT6 [Source:SGD;Acc:S000003346]
G	YGR121W-A	YGR121W-A	1	0	1	Putative protein of unknown function [Source:SGD;Acc:S000028550]
G	YGR122C-A	YGR122C-A	0	nf	1	Dubious open reading frame unlikely to encode a functional protein, similar to YLR334C and YOL106W [Source:SGD;Acc:S000007240]
G	YGR146C-A	YGR146C-A	0	nf	1	Putative protein of unknown function [Source:SGD;Acc:S000028638]
G	YGR151C	YGR151C	3	-1.4	1	Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data; overlaps almost completely with the verified ORF RSR1/BUD1/YGR152C [Source:SGD;Acc:S000003383]
G	YGR160W	YGR160W	3	-2	1	Dubious open reading frame unlikely to encode a functional protein, based on available experimental and comparative sequence data [Source:SGD;Acc:S000003392]
G	YGR174W-A	YGR174W-A	0	nf	1	Putative protein of unknown function; predicted to have a role in cell budding based on computational guilt by association analysis [Source:SGD;Acc:S000028639]
G	YGR176W	YGR176W	2	-0.1	1	Dubious open reading frame unlikely to encode a functional protein, based on available experimental and comparative sequence data [Source:SGD;Acc:S000003408]
G	YGR204C-A	YGR204C-A	0	nf	1	Putative protein of unknown function; identified by gene-trapping, microarray-based expression analysis, and genome-wide homology searching [Source:SGD;Acc:S000028640]
G	YGR228W	YGR228W	3	-1.9	1	Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data; partially overlaps the verified ORF SMI1/YGR229C [Source:SGD;Acc:S000003460]
G	YGR240C-A	YGR240C-A	0	nf	1	Putative protein of unknown function; identified by fungal homology and RT-PCR [Source:SGD;Acc:S000028551]
G	YGR242W	YGR242W	5	-1.2	1	Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data; partially overlaps the verified ORF YAP1802/YGR241C [Source:SGD;Acc:S000003474]
G	YGR269W	YGR269W	0	nf	1	Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data; partially overlaps the uncharacterized ORF HUA1/YGR268C [Source:SGD;Acc:S000003501]
G	YGR270C-A	YGR270C-A	0	nf	1	Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data; completely overlaps the verified ORF YTA7/YGR270W [Source:SGD;Acc:S000028641]
G	YGR290W	YGR290W	0	nf	1	Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data; putative HLH protein; partially overlaps the verified ORF MAL11/YGR289C (a high-affinity maltose transporter) [Source:SGD;Acc:S000003522]
G	YGR293C	YGR293C	0	nf	1	Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data; partially overlaps the uncharacterized ORF YGR294W [Source:SGD;Acc:S000003525]
G	YGR294W	PAU12	2	-1.1	1	Protein of unknown function, member of the seripauperin multigene family encoded mainly in subtelomeric regions [Source:SGD;Acc:S000003526]
G	YGR296C-B	YGR296C-B	1	-1.8	1	Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data; contained completely within TEL07R [Source:SGD;Acc:S000028643]
H	YHL002C-A	YHL002C-A	2	-1.7	1	Dubious open reading frame unlikely to encode a functional protein, based on available experimental and comparative sequence data [Source:SGD;Acc:S000028770]
H	YHL005C	YHL005C	1	-1.2	1	Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data; partially overlaps the verified ORF YHL004W [Source:SGD;Acc:S000000997]
H	YHL006W-A	YHL006W-A	3	-1.2	1	Dubious open reading frame unlikely to encode a functional protein, based on available experimental and comparative sequence data [Source:SGD;Acc:S000028771]
H	YHL022C	SPO11	15	-2	1	Meiosis-specific protein that initiates meiotic recombination by catalyzing the formation of double-strand breaks in DNA via a transesterification reaction; required for homologous chromosome pairing and synaptonemal complex formation [Source:SGD;Acc:S000001014]
H	YHL037C	YHL037C	0	nf	1	Dubious open reading frame unlikely to encode a functional protein, based on available experimental and comparative sequence data [Source:SGD;Acc:S000001029]
H	YHL041W	YHL041W	0	nf	1	Dubious open reading frame unlikely to encode a protein, based on experimental and comparative sequence data [Source:SGD;Acc:S000001033]
H	YHL045W	YHL045W	0	nf	1	Putative protein of unknown function; not an essential gene [Source:SGD;Acc:S000001037]
H	YHL046C	PAU13	1	-0.1	1	Protein of unknown function, member of the seripauperin multigene family encoded mainly in subtelomeric regions; expression is induced after ethanol shock [Source:SGD;Acc:S000001038]
H	YHL048C-A	YHL048C-A	1	-1.2	1	Putative protein of unknown function; identified by expression profiling and mass spectrometry [Source:SGD;Acc:S000028829]
H	YHL050W-A	YHL050W-A	43	-1.6	1	Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data; identified by gene-trapping, microarray-based expression analysis, and genome-wide homology searching [Source:SGD;Acc:S000028644]
H	YHR007C-A	YHR007C-A	0	nf	1	Putative protein of unknown function; identified by expression profiling and mass spectrometry [Source:SGD;Acc:S000028830]
H	YHR021W-A	ECM12	1	-1.1	1	Putative protein of unknown function; may contribute to cell wall biosynthesis, mutants display zymolyase hypersensitivity [Source:SGD;Acc:S000003531]
H	YHR022C-A	YHR022C-A	0	nf	1	Putative protein of unknown function; identified by gene-trapping, microarray-based expression analysis, and genome-wide homology searching [Source:SGD;Acc:S000028645]
H	YHR028W-A	YHR028W-A	4	-1.4	1	Dubious open reading frame unlikely to encode a functional protein, based on available experimental and comparative sequence data [Source:SGD;Acc:S000028776]
H	YHR032W-A	YHR032W-A	0	nf	1	Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data; partially overlaps the dubious ORF YHR032C-A [Source:SGD;Acc:S000028831]
H	YHR050W-A	YHR050W-A	3	-1.5	1	Protein of unknown function; identified by expression profiling and mass spectrometry [Source:SGD;Acc:S000028832]
H	YHR052W-A	YHR052W-A	0	nf	1	Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data; partially overlaps CUP1-1 [Source:SGD;Acc:S000028647]
H	YHR054W-A	YHR054W-A	0	nf	1	Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data; partially overlaps CUP1-2 [Source:SGD;Acc:S000028648]
H	YHR063W-A	YHR063W-A	9	-11.1	1	Dubious open reading frame unlikely to encode a functional protein, based on available experimental and comparative sequence data [Source:SGD;Acc:S000028778]
H	YHR069C-A	YHR069C-A	0	nf	1	Dubious open reading frame unlikely to encode a functional protein, based on available experimental and comparative sequence data [Source:SGD;Acc:S000028779]
H	YHR073C-B	YHR073C-B	3	-1.3	1	Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data; partially overlaps verified ORF YHR073W; identified by expression profiling and mass spectrometry [Source:SGD;Acc:S000028833]
H	YHR073W-A	YHR073W-A	7	-1.8	1	Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data; partially overlaps verified ORF YHR073W; identified by expression profiling and mass spectrometry [Source:SGD;Acc:S000028834]
H	YHR079C-A	SAE3	1	0	1	Meiosis specific protein involved in DMC1-dependent meiotic recombination, forms heterodimer with Mei5p; proposed to be an assembly factor for Dmc1p [Source:SGD;Acc:S000001957]
H	YHR086W-A	YHR086W-A	1	-1.1	1	Putative protein of unknown function; identified by fungal homology and RT-PCR [Source:SGD;Acc:S000028552]
H	YHR125W	YHR125W	1	-0.1	1	Dubious open reading frame unlikely to encode a functional protein, based on available experimental and comparative sequence data [Source:SGD;Acc:S000001167]
H	YHR126C	ANS1	2	0	1	Putative protein of unknown function; transcription dependent upon Azf1p [Source:SGD;Acc:S000001168]
H	YHR130C	YHR130C	2	-1.3	1	Dubious open reading frame unlikely to encode a functional protein, based on available experimental and comparative sequence data [Source:SGD;Acc:S000001172]
H	YHR131W-A	YHR131W-A	0	nf	1	Dubious open reading frame unlikely to encode a protein; partially overlaps the uncharacterized ORF YHR131C [Source:SGD;Acc:S000028782]
H	YHR145C	YHR145C	3	-1.2	1	Dubious open reading frame unlikely to encode a functional protein, based on available experimental and comparative sequence data [Source:SGD;Acc:S000001188]
H	YHR153C	SPO16	0	nf	1	Meiosis-specific protein involved in synaptonemal complex assembly; implicated in regulation of crossover formation; required for sporulation [Source:SGD;Acc:S000001196]
H	YHR165W-A	YHR165W-A	8	-9.8	1	Dubious ORF unlikely to encode a functional protein, based on available experimental and comparative sequence data [Source:SGD;Acc:S000028783]
H	YHR173C	YHR173C	0	nf	1	Dubious ORF unlikely to encode a functional protein, based on available experimental and comparative sequence data [Source:SGD;Acc:S000001216]
H	YHR175W-A	YHR175W-A	0	nf	1	Putative protein of unknown function; identified by fungal homology and RT-PCR [Source:SGD;Acc:S000028553]
H	YHR180C-B	YHR180C-B	0	nf	1	Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data; completely overlaps the dubious ORF YHR180W-A [Source:SGD;Acc:S000028554]
H	YHR180W-A	YHR180W-A	0	nf	1	Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data; partially overlaps dubious ORF YHR180C-B and long terminal repeat YHRCsigma3 [Source:SGD;Acc:S000028555]
H	YHR182C-A	YHR182C-A	0	nf	1	Dubious open reading frame unlikely to encode a functional protein, based on available experimental and comparative sequence data [Source:SGD;Acc:S000028784]
H	YHR185C	PFS1	3	-1.2	1	Sporulation protein required for prospore membrane formation at selected spindle poles, ensures functionality of all four spindle pole bodies during meiosis II; not required for meiotic recombination or meiotic chromosome segregation [Source:SGD;Acc:S000001228]
H	YHR212W-A	YHR212W-A	0	nf	1	Putative protein of unknown function; identified by gene-trapping, microarray-based expression analysis, and genome-wide homology searching [Source:SGD;Acc:S000028650]
H	YHR213W	YHR213W	0	nf	1	Possible pseudogene; has similarity to Flo1p, which is a lectin-like protein involved in flocculation [Source:SGD;Acc:S000001256]
H	YHR213W-B	YHR213W-B	0	nf	1	Putative protein of unknown function; identified by gene-trapping, microarray-based expression analysis, and genome-wide homology searching [Source:SGD;Acc:S000028652]
H	YHR214C-D	YHR214C-D	0	nf	1	Putative protein of unknown function; identified by gene-trapping, microarray-based expression analysis, and genome-wide homology searching [Source:SGD;Acc:S000028653]
H	YHR217C	YHR217C	0	nf	1	Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data; located in the telomeric region TEL08R. [Source:SGD;Acc:S000001260]
H	YHR219C-A	YHR219C-A	43	-1.6	1	Dubious open reading frame unlikely to encode a functional protein; identified by gene-trapping, microarray-based expression analysis, and genome-wide homology searching [Source:SGD;Acc:S000028655]
I	YIL012W	YIL012W	0	nf	1	Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data [Source:SGD;Acc:S000001274]
I	YIL014C-A	YIL014C-A	0	nf	1	Putative protein of unknown function [Source:SGD;Acc:S000003536]
I	YIL020C-A	YIL020C-A	4	-1.6	1	Dubious open reading frame unlikely to encode a functional protein, based on available experimental and comparative sequence data [Source:SGD;Acc:S000028787]
I	YIL025C	YIL025C	5	-1.7	1	Dubious open reading frame unlikely to encode a functional protein, based on available experimental and comparative sequence data [Source:SGD;Acc:S000001287]
I	YIL028W	YIL028W	1	-1.1	1	Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data [Source:SGD;Acc:S000001290]
I	YIL029C	YIL029C	2	-1.8	1	Putative protein of unknown function; deletion confers sensitivity to 4-(N-(S-glutathionylacetyl)amino) phenylarsenoxide (GSAO) [Source:SGD;Acc:S000001291]
I	YIL029W-A	YIL029W-A	4	-1.9	1	Dubious ORF unlikely to encode a functional protein, based on available experimental and comparative sequence data [Source:SGD;Acc:S000028788]
I	YIL030W-A	YIL030W-A	2	-1.6	1	Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data; partially overlaps the verified gene YIL031W. [Source:SGD;Acc:S000028789]
I	YIL032C	YIL032C	1	-1.1	1	Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data [Source:SGD;Acc:S000001294]
I	YIL046W-A	YIL046W-A	0	nf	1	Putative protein of unknown function; identified by expression profiling and mass spectrometry [Source:SGD;Acc:S000028836]
I	YIL054W	YIL054W	0	nf	1	Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data [Source:SGD;Acc:S000001316]
I	YIL058W	YIL058W	5	-1.3	1	Dubious open reading frame unlikely to encode a functional protein, based on available experimental and comparative sequence data [Source:SGD;Acc:S000001320]
I	YIL086C	YIL086C	1	-1.1	1	Dubious open reading frame unlikely to encode a functional protein, based on available experimental and comparative sequence data [Source:SGD;Acc:S000001348]
I	YIL089W	YIL089W	2	-1.2	1	Protein of unknown function found in the ER and vacuole lumen; overexpression of YIL089W affects endocytic protein trafficking [Source:SGD;Acc:S000001351]
I	YIL100C-A	YIL100C-A	0	nf	1	Dubious open reading frame unlikely to encode a functional protein, based on available experimental and comparative sequence data [Source:SGD;Acc:S000028794]
I	YIL100W	YIL100W	0	nf	1	Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data; completely overlaps the dubious ORF YIL100C-A [Source:SGD;Acc:S000001362]
I	YIL102C	YIL102C	0	nf	1	Putative protein of unknown function [Source:SGD;Acc:S000001364]
I	YIL102C-A	YIL102C-A	0	nf	1	Putative protein of unknown function, identified based on comparisons of the genome sequences of six Saccharomyces species [Source:SGD;Acc:S000113587]
I	YIL105W-A	YIL105W-A	0	nf	1	Dubious open reading frame; completely overlaps the verified gene SLM1; identified by gene-trapping, microarray-based expression analysis, and genome-wide homology searching [Source:SGD;Acc:S000028657]
I	YIL115W-A	YIL115W-A	1	-1.3	1	Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data; overlaps the verified gene NUP159/YIL115C [Source:SGD;Acc:S000028795]
I	YIL141W	YIL141W	3	-1.6	1	Dubious open reading frame unlikely to encode a functional protein, based on available experimental and comparative sequence data [Source:SGD;Acc:S000001403]
I	YIL142C-A	YIL142C-A	4	-1.5	1	Dubious ORF unlikely to encode a functional protein, based on available experimental and comparative sequence data [Source:SGD;Acc:S000028796]
I	YIL156W-A	YIL156W-A	3	-1.7	1	Dubious open reading frame unlikely to encode a functional protein, based on available experimental and comparative sequence data [Source:SGD;Acc:S000028797]
I	YIL165C	YIL165C	1	0	1	Putative protein of unknown function; mutant exhibits mitophagy defects; in closely related species and other S. cerevisiae strain backgrounds YIL165C and adjacent ORF, YIL164C, likely constitute a single ORF encoding a nitrilase gene [Source:SGD;Acc:S000001427]
I	YIL176C	PAU14	2	-1.1	1	Protein of unknown function, member of the seripauperin multigene family encoded mainly in subtelomeric regions; identical to Pau1p [Source:SGD;Acc:S000001438]
I	YIL177W-A	YIL177W-A	1	-1.8	1	Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data; completely overlaps the uncharacterized gene YIL177C [Source:SGD;Acc:S000028658]
I	YIR023C-A	YIR023C-A	0	nf	1	Dubious open reading frame unlikely to encode a functional protein, based on available experimental and comparative sequence data [Source:SGD;Acc:S000028801]
J	YJL007C	YJL007C	4	-1.6	1	Dubious open reading frame unlikely to encode a functional protein, based on available experimental and comparative sequence data [Source:SGD;Acc:S000003544]
J	YJL009W	YJL009W	0	nf	1	Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data; partially overlaps CCT8/YJL008C, a verified gene encoding a subunit of the cytosolic chaperonin Cct ring complex [Source:SGD;Acc:S000003546]
J	YJL015C	YJL015C	2	-0.1	1	Dubious open reading frame unlikely to encode a functional protein; expression if heat-inducible; located in promoter region of essential CCT3 gene encoding a subunit of the cytosolic chaperonin Cct ring complex, overlaps ORF YJL016W [Source:SGD;Acc:S000003552]
J	YJL020W-A	YJL020W-A	0	nf	1	Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data; completely overlaps the verified gene YJL020C/BBC1 [Source:SGD;Acc:S000028659]
J	YJL022W	YJL022W	2	-1.3	1	Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data; partially overlaps the verified gene PET130 [Source:SGD;Acc:S000003559]
J	YJL026C-A	YJL026C-A	4	-1.6	1	Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data; completely overlaps the verified gene YJL026W/RNR2 [Source:SGD;Acc:S000028660]
J	YJL027C	YJL027C	4	-1.3	1	Putative protein of unknown function [Source:SGD;Acc:S000003564]
J	YJL028W	YJL028W	0	nf	1	Protein of unknown function; may interact with ribosomes, based on co-purification experiments [Source:SGD;Acc:S000003565]
J	YJL032W	YJL032W	2	-1.5	1	Dubious open reading frame unlikely to encode a functional protein; overlaps 3' end of essential BET4 gene encoding the alpha subunit of Type II geranylgeranyltransferase [Source:SGD;Acc:S000003569]
J	YJL043W	YJL043W	8	-1.5	1	Putative protein of unknown function; YJL043W is a non-essential gene [Source:SGD;Acc:S000003579]
J	YJL047C-A	YJL047C-A	4	-1.1	1	Putative protein of unknown function [Source:SGD;Acc:S000028804]
J	YJL052C-A	YJL052C-A	0	nf	1	Putative protein of unknown function, identified based on comparison to related yeast species [Source:SGD;Acc:S000007610]
J	YJL064W	YJL064W	0	nf	1	Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data; completely overlaps the verified gene YJL065C/DLS1 [Source:SGD;Acc:S000003600]
J	YJL075C	APQ13	0	nf	1	Dubious open reading frame, unlikely to encode a protein; not conserved in closely related Saccharomyces species; 85% of ORF overlaps the verified gene NET1; null mutant is sensitive to sorbate [Source:SGD;Acc:S000003611]
J	YJL077W-A	YJL077W-A	0	nf	1	Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data; completely overlaps the verified gene YJL077C/ICS3 [Source:SGD;Acc:S000028661]
J	YJL077W-B	YJL077W-B	2	-1.5	1	Putative protein of unknown function; identified by gene-trapping, microarray-based expression analysis, and genome-wide homology searching [Source:SGD;Acc:S000028662]
J	YJL086C	YJL086C	0	nf	1	Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data; partially overlaps the verified genes YJL085W/EXO70 and YJL087C/TRL1 [Source:SGD;Acc:S000003622]
J	YJL108C	PRM10	5	-1.6	1	Pheromone-regulated protein, proposed to be involved in mating; predicted to have 5 transmembrane segments; induced by treatment with 8-methoxypsoralen and UVA irradiation [Source:SGD;Acc:S000003644]
J	YJL136W-A	YJL136W-A	0	nf	1	Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data; identified by SAGE [Source:SGD;Acc:S000028806]
J	YJL142C	IRC9	3	-11.6	1	Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data; partially overlaps verified gene YJL141C; null mutant displays increased levels of spontaneous Rad52p foci [Source:SGD;Acc:S000003678]
J	YJL150W	YJL150W	1	-1.5	1	Dubious open reading frame unlikely to encode a functional protein, based on available experimental and comparative sequence data [Source:SGD;Acc:S000003686]
J	YJL152W	YJL152W	1	-1.3	1	Dubious ORF unlikely to encode a functional protein, based on available experimental and comparative sequence data [Source:SGD;Acc:S000003688]
J	YJL156W-A	YJL156W-A	1	-1.2	1	Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data [Source:SGD;Acc:S000007613]
J	YJL182C	YJL182C	1	-1.4	1	Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data; partially overlaps uncharacterized ORF YJL181W [Source:SGD;Acc:S000003718]
J	YJL195C	YJL195C	7	-7.3	1	Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data; partially overlaps the verified gene YJL194W/CDC6 [Source:SGD;Acc:S000003731]
J	YJL197C-A	YJL197C-A	1	-1.1	1	Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data; completely overlaps the verified gene YJL197C/UBP12 [Source:SGD;Acc:S000028839]
J	YJL202C	YJL202C	1	0	1	Dubious open reading frame unlikely to encode a functional protein, based on available experimental and comparative sequence data; overlaps 3' end of essential PRP21 gene encoding a subunit of the SF3a splicing factor complex [Source:SGD;Acc:S000003738]
J	YJL211C	YJL211C	2	-1.2	1	Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data; partially overlaps the verified gene YJL210W/PEX2 [Source:SGD;Acc:S000003747]
J	YJL222W-B	YJL222W-B	1	-1.1	1	Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data [Source:SGD;Acc:S000028664]
J	YJL223C	PAU1	2	-1.1	1	Member of the seripauperin multigene family encoded mainly in subtelomeric regions, active during alcoholic fermentation, regulated by anaerobiosis, negatively regulated by oxygen, repressed by heme; identical to Pau14p [Source:SGD;Acc:S000003759]
J	YJL225W-A	YJL225W-A	1	-1.8	1	Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data; completely overlaps the uncharacterized gene YJL225C [Source:SGD;Acc:S000028665]
J	YJR023C	YJR023C	1	-1.4	1	Putative protein of unknown function; open reading frame overlaps LSM8/YJR022W encoding an essential snRNP protein required for RNA processing and splicing [Source:SGD;Acc:S000003784]
J	YJR037W	YJR037W	3	-1	1	Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data; partially overlaps verified gene HUL4/YJR036C; deletion mutant has decreased spore survival in Drosophila feces [Source:SGD;Acc:S000003798]
J	YJR079W	YJR079W	0	nf	1	Putative protein of unknown function; mutation results in impaired mitochondrial respiration [Source:SGD;Acc:S000003840]
J	YJR114W	YJR114W	4	-1.6	1	Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data; partially overlaps the verified ORF RSM7/YJR113C [Source:SGD;Acc:S000003875]
J	YJR128W	YJR128W	5	-1.4	1	Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data; partially overlaps the verified ORF RSF2 [Source:SGD;Acc:S000003889]
J	YJR140W-A	YJR140W-A	0	nf	1	Dubious open reading frame; completely overlaps the verified gene HIR3; identified by gene-trapping, microarray-based expression analysis, and genome-wide homology searching [Source:SGD;Acc:S000028666]
J	YJR151W-A	YJR151W-A	1	-1.5	1	Putative protein of unknown function; identified by fungal homology and RT-PCR; predicted to have a role in transcription based on computational guilt by association analysis [Source:SGD;Acc:S000028557]
J	YJR162C	YJR162C	1	-1.7	1	Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data [Source:SGD;Acc:S000003923]
K	YKL030W	YKL030W	4	-1.7	1	Dubious open reading frame, unlikely to encode a protein; not conserved in closely related <i>Saccharomyces</i> species; partially overlaps the verified gene MAE1 [Source:SGD;Acc:S000001513]
K	YKL031W	YKL031W	1	-1.8	1	Dubious open reading frame, unlikely to encode a protein; not conserved in closely related Saccharomyces species [Source:SGD;Acc:S000001514]
K	YKL037W	AIM26	3	-1.7	1	Putative protein of unknown function; null mutant is viable and displays elevated frequency of mitochondrial genome loss; null mutation confers sensitivity to tunicamycin and DTT [Source:SGD;Acc:S000001520]
K	YKL070W	YKL070W	2	-0.1	1	Putative protein of unknown function; expression induced in cells treated with mycotoxins patulin or citrinin; the authentic, non-tagged protein is detected in highly purified mitochondria in high-throughput studies [Source:SGD;Acc:S000001553]
K	YKL076C	PSY1	11	-1.5	1	Dubious open reading frame, unlikely to encode a protein; not conserved in closely related Saccharomyces species; 69% of ORF overlaps the uncharacterized ORF YKL075C [Source:SGD;Acc:S000001559]
K	YKL083W	YKL083W	4	-1.4	1	Dubious open reading frame, unlikely to encode a protein; not conserved in closely related <i>Saccharomyces</i> species; partially overlaps the verified essential gene RRP14 [Source:SGD;Acc:S000001566]
K	YKL096C-B	YKL096C-B	1	-1	1	Putative protein of unknown function; identified by gene-trapping, microarray-based expression analysis, and genome-wide homology searching [Source:SGD;Acc:S000028667]
K	YKL097C	YKL097C	4	-1.7	1	Dubious open reading frame, unlikely to encode a protein; not conserved in closely related <i>Saccharomyces</i> species [Source:SGD;Acc:S000001580]
K	YKL100W-A	YKL100W-A	3	-1.5	1	Putative protein of unknown function; identified by expression profiling and mass spectrometry [Source:SGD;Acc:S000028840]
K	YKL106C-A	YKL106C-A	1	-1.1	1	Putative protein of unknown function; identified by homology to uncharacterized proteins in other fungi [Source:SGD;Acc:S000007616]
K	YKL111C	YKL111C	2	-1.4	1	Dubious open reading frame, unlikely to encode a protein; not conserved in closely related <i>Saccharomyces</i> species; partially overlaps the verified essential gene ABF1 [Source:SGD;Acc:S000001594]
K	YKL115C	YKL115C	0	nf	1	Dubious open reading frame, unlikely to encode a protein; partially overlaps the verified gene PRR1 [Source:SGD;Acc:S000001598]
K	YKL118W	YKL118W	1	-1.7	1	Dubious open reading frame, unlikely to encode a protein; partially overlaps the verified gene VPH2 [Source:SGD;Acc:S000001601]
K	YKL123W	YKL123W	2	-1.8	1	Dubious open reading frame, unlikely to encode a protein; partially overlaps the verified gene SSH4 [Source:SGD;Acc:S000001606]
K	YKL131W	YKL131W	12	-1.8	1	Dubious ORF unlikely to encode a functional protein, based on available experimental and comparative sequence data [Source:SGD;Acc:S000001614]
K	YKL136W	YKL136W	1	-1.2	1	Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data; partially overlaps the verified ORF APL2/YKL135C [Source:SGD;Acc:S000001619]
K	YKL145W-A	YKL145W-A	4	-1.3	1	Dubious open reading frame, unlikely to encode a protein; completely overlaps the verified essential gene RPT1; identified by expression profiling and mass spectrometry [Source:SGD;Acc:S000028841]
K	YKL153W	YKL153W	0	nf	1	Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data; transcription of both YLK153W and the overlapping essential gene GPM1 is reduced in the gcr1 null mutant [Source:SGD;Acc:S000001636]
K	YKL156C-A	YKL156C-A	2	-1.4	1	Dubious open reading frame unlikely to encode a protein; completely overlaps the verified gene RPS27A; identified by gene-trapping, microarray-based expression analysis, and genome-wide homology searching [Source:SGD;Acc:S000028668]
K	YKL162C-A	YKL162C-A	0	nf	1	Dubious open reading frame unlikely to encode a functional protein, based on available experimental and comparative sequence data [Source:SGD;Acc:S000007244]
K	YKL165C-A	YKL165C-A	3	-1.6	1	Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data [Source:SGD;Acc:S000007617]
K	YKL177W	YKL177W	2	-1.6	1	Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data; partially overlaps the verified gene STE3 [Source:SGD;Acc:S000001660]
K	YKL183C-A	YKL183C-A	0	nf	1	Putative protein of unknown function; identified by fungal homology and RT-PCR [Source:SGD;Acc:S000028558]
K	YKL225W	YKL225W	1	-1.8	1	Dubious open reading frame unlikely to encode a functional protein, based on available experimental and comparative sequence data [Source:SGD;Acc:S000001708]
K	YKR012C	YKR012C	3	-1.7	1	Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data; partially overlaps the verified gene PRY2 [Source:SGD;Acc:S000001720]
K	YKR032W	YKR032W	0	nf	1	Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data [Source:SGD;Acc:S000001740]
K	YKR035C	OPI8	0	nf	1	Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data; partially overlaps verified gene DID2/YKR035W-A [Source:SGD;Acc:S000001743]
K	YKR040C	YKR040C	0	nf	1	Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data; partially overlaps the uncharacterized ORF YKR041W [Source:SGD;Acc:S000001748]
K	YKR073C	YKR073C	1	-1.2	1	Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data [Source:SGD;Acc:S000001781]
K	YKR075W-A	YKR075W-A	0	nf	1	Dubious open reading frame unlikely to encode a protein; completely overlaps the uncharacterized gene YKR075C; identified by gene-trapping, microarray-based expression analysis, and genome-wide homology searching [Source:SGD;Acc:S000028669]
L	YLL006W-A	YLL006W-A	1	-1.4	1	Putative protein of unknown function; identified by fungal homology and RT-PCR [Source:SGD;Acc:S000028560]
L	YLL030C	RRT7	0	nf	1	Identified in a screen for mutants with increased levels of rDNA transcription; dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data [Source:SGD;Acc:S000003953]
L	YLL037W	YLL037W	0	nf	1	Dubious open reading frame unlikely to encode a functional protein; overlaps 3' end of essential PRP19 gene encoding an RNA splicing factor [Source:SGD;Acc:S000003960]
L	YLL044W	YLL044W	0	nf	1	Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data; transcription of both YLL044W and the overlapping gene RPL8B is reduced in the gcr1 null mutant [Source:SGD;Acc:S000003967]
L	YLL047W	YLL047W	1	0	1	Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data; partially overlaps verified gene RNP1 [Source:SGD;Acc:S000003970]
L	YLL064C	PAU18	0	nf	1	Protein of unknown function, member of the seripauperin multigene family encoded mainly in subtelomeric regions; identical to Pau6p [Source:SGD;Acc:S000003987]
L	YLL065W	YLL065W	2	-1.6	1	Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data; overlaps chromosome XII telomeric element core sequences [Source:SGD;Acc:S000003988]
L	YLL066W-A	YLL066W-A	43	-1.6	1	Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data; completely overlaps the uncharacterized ORF YLL066C [Source:SGD;Acc:S000028671]
L	YLL066W-B	YLL066W-B	0	nf	1	Putative protein of unknown function; overexpression causes a cell cycle delay or arrest [Source:SGD;Acc:S000028672]
L	YLL067W-A	YLL067W-A	43	-1.6	1	Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data; completely overlaps YLL067C [Source:SGD;Acc:S000028673]
L	YLR010C	TEN1	3	-1.6	1	Protein that regulates telomeric length; protects telomeric ends in a complex with Cdc13p and Stn1p [Source:SGD;Acc:S000004000]
L	YLR012C	YLR012C	0	nf	1	Putative protein of unknown function; YLR012C is not an essential gene [Source:SGD;Acc:S000004002]
L	YLR013W	GAT3	3	-1.7	1	Protein containing GATA family zinc finger motifs [Source:SGD;Acc:S000004003]
L	YLR042C	YLR042C	1	0	1	Protein of unknown function; localizes to the cytoplasm; YLL042C is not an essential gene [Source:SGD;Acc:S000004032]
L	YLR053C	YLR053C	0	nf	1	Putative protein of unknown function [Source:SGD;Acc:S000004043]
L	YLR062C	BUD28	3	-1.4	1	Dubious open reading frame, unlikely to encode a protein; not conserved in closely related Saccharomyces species; 98% of ORF overlaps the verified gene RPL22A; diploid mutant displays a weak budding pattern phenotype in a systematic assay [Source:SGD;Acc:S000004052]
L	YLR076C	YLR076C	6	-1.2	1	Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data; partially overlaps the essential gene RPL10 which encodes the ribosomal protein L10 [Source:SGD;Acc:S000004066]
L	YLR101C	YLR101C	0	nf	1	Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data; partially overlaps the verified, essential ORF ERG27/YLR100W [Source:SGD;Acc:S000004091]
L	YLR111W	YLR111W	4	0	1	Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data [Source:SGD;Acc:S000004101]
L	YLR123C	YLR123C	0	nf	1	Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data; partially overlaps the dubious ORF YLR122C; contains characteristic aminoacyl-tRNA motif [Source:SGD;Acc:S000004113]
L	YLR124W	YLR124W	0	nf	1	Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data [Source:SGD;Acc:S000004114]
L	YLR140W	YLR140W	1	-1.8	1	Dubious open reading frame unlikely to encode a functional protein; overlaps essential RRN5 gene which encodes a member of the UAF transcription factor involved in transcription of rDNA by RNA polymerase I [Source:SGD;Acc:S000004130]
L	YLR149C-A	YLR149C-A	2	0	1	Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data [Source:SGD;Acc:S000007619]
L	YLR154C-G	YLR154C-G	1	-1.7	1	Putative protein of unknown function identified by fungal homology comparisons and RT-PCR; this ORF is contained within RDN25-2 and RDN37-2 [Source:SGD;Acc:S000028561]
L	YLR154W-A	YLR154W-A	0	nf	1	Dubious open reading frame unlikely to encode a protein; encoded within the the 25S rRNA gene on the opposite strand [Source:SGD;Acc:S000028675]
L	YLR154W-E	YLR154W-E	9	-1.7	1	Dubious open reading frame unlikely to encode a protein; encoded within the the 35S rRNA gene on the opposite strand [Source:SGD;Acc:S000028676]
L	YLR156W	YLR156W	1	-1.1	1	Putative protein of unknown function; exhibits a two-hybrid interaction with Jsn1p in a large-scale analysis [Source:SGD;Acc:S000004146]
L	YLR157W-D	YLR157W-D	1	-1.6	1	Putative protein of unknown function; identified by gene-trapping, microarray-based expression analysis, and genome-wide homology searching [Source:SGD;Acc:S000028677]
L	YLR159W	YLR159W	1	-1.1	1	Putative protein of unknown function; YLR156W, YLR159W, and YLR161W are three identical open reading frames encoded near the ribosomal DNA region of chromosome 12 [Source:SGD;Acc:S000004149]
L	YLR161W	YLR161W	1	-1.1	1	Putative protein of unknown function; YLR156W, YLR159W, and YLR161W are three identical open reading frames encoded near the ribosomal DNA region of chromosome 12 [Source:SGD;Acc:S000004151]
L	YLR162W-A	RRT15	3	-1.9	1	Putative protein of unknown function identified by fungal homology comparisons and RT-PCR; identified in a screen for mutants with decreased levels of rDNA transcription [Source:SGD;Acc:S000028567]
L	YLR163W-A	YLR163W-A	3	-1.2	1	Dubious open reading frame unlikely to encode a protein, based on experimental and comparative sequence data [Source:SGD;Acc:S000028844]
L	YLR169W	YLR169W	1	-1.1	1	Dubious open reading frame unlikely to encode a functional protein, based on available experimental and comparative sequence data [Source:SGD;Acc:S000004159]
L	YLR184W	YLR184W	7	-1.3	1	Dubious ORF unlikely to encode a functional protein, based on available experimental and comparative sequence data [Source:SGD;Acc:S000004174]
L	YLR198C	YLR198C	0	nf	1	Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data; overlaps the verified gene SIK1/YLR197W [Source:SGD;Acc:S000004188]
L	YLR217W	YLR217W	2	-1.2	1	Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data; partially overlaps the verified gene CPR6 [Source:SGD;Acc:S000004207]
L	YLR222C-A	YLR222C-A	0	nf	1	Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data; partially overlaps the verified gene IFH1 [Source:SGD;Acc:S000028568]
L	YLR230W	YLR230W	0	nf	1	Dubious open reading frame unlikely to encode a functional protein; overlaps 5' end of essential CDC42 gene which encodes a small Rho-like GTPase essential for establishment and maintenance of cell polarity [Source:SGD;Acc:S000004220]
L	YLR232W	YLR232W	1	-1.6	1	Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data; partially overlaps the verified gene BNA5 [Source:SGD;Acc:S000004222]
L	YLR235C	YLR235C	2	-1.8	1	Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data; partially overlaps the verified gene TOP3 [Source:SGD;Acc:S000004225]
L	YLR236C	YLR236C	13	-1.6	1	Dubious open reading frame unlikely to encode a functional protein, based on available experimental and comparative sequence data [Source:SGD;Acc:S000004226]
L	YLR252W	YLR252W	5	-1.9	1	Dubious open reading frame unlikely to encode a protein, based on experimental and comparative sequence data; partially overlaps the verified gene SYM1, a mitochondrial protein involved in ethanol metabolism [Source:SGD;Acc:S000004242]
L	YLR279W	YLR279W	4	-1.7	1	Dubious open reading frame unlikely to encode a functional protein, based on available experimental and comparative sequence data [Source:SGD;Acc:S000004269]
L	YLR282C	YLR282C	0	nf	1	Dubious open reading frame unlikely to encode a functional protein, based on available experimental and comparative sequence data; deletion mutation confers an increase in Ty1 transposition [Source:SGD;Acc:S000004272]
L	YLR285C-A	YLR285C-A	0	nf	1	Putative protein of unknown function; identified by fungal homology and RT-PCR [Source:SGD;Acc:S000028569]
L	YLR286W-A	YLR286W-A	2	-1.4	1	Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data; overlaps the verified gene CTS1 [Source:SGD;Acc:S000028679]
L	YLR294C	YLR294C	1	-1.5	1	Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data; partially overlaps the verified gene ATP14 [Source:SGD;Acc:S000004285]
L	YLR296W	YLR296W	3	-1.9	1	Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data [Source:SGD;Acc:S000004287]
L	YLR299C-A	YLR299C-A	0	nf	1	Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data; overlaps the verified gene ECM38 [Source:SGD;Acc:S000028680]
L	YLR311C	YLR311C	7	-1.4	1	Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data [Source:SGD;Acc:S000004302]
L	YLR317W	YLR317W	3	-1.1	1	Dubious open reading frame; may be part of a bicistronic transcript with NKP2/YLR315W; overlaps the verified ORF TAD3/YLR316C [Source:SGD;Acc:S000004309]
L	YLR322W	VPS65	0	nf	1	Dubious open reading frame, unlikely to encode a protein; not conserved in closely related Saccharomyces species; 75% of ORF overlaps the verified gene SFH1; deletion causes a vacuolar protein sorting defect and blocks anaerobic growth [Source:SGD;Acc:S000004314]
L	YLR331C	JIP3	14	-1.6	1	Dubious open reading frame, unlikely to encode a protein; not conserved in closely related Saccharomyces species; 98% of ORF overlaps the verified gene MID2 [Source:SGD;Acc:S000004323]
L	YLR342W-A	YLR342W-A	1	0	1	Putative protein of unknown function [Source:SGD;Acc:S000028571]
L	YLR347W-A	YLR347W-A	0	nf	1	Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data; overlaps the verified ORF KAP95/YLR347C [Source:SGD;Acc:S000028681]
L	YLR358C	YLR358C	3	-1.7	1	Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data; partially overlaps the verified ORF RSC2/YLR357W [Source:SGD;Acc:S000004350]
L	YLR364C-A	YLR364C-A	3	-1.8	1	Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data; partially overlaps the dubious ORF YLR366W [Source:SGD;Acc:S000028846]
L	YLR365W	YLR365W	9	-1.2	1	Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data; partially overlaps dubious gene YLR364C-A; YLR365W is not an essential gene [Source:SGD;Acc:S000004357]
L	YLR366W	YLR366W	3	-1.4	1	Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data; partially overlaps the dubious ORF YLR364C-A [Source:SGD;Acc:S000004358]
L	YLR374C	YLR374C	40	-7.3	1	Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data; partially overlaps the uncharacterized ORF STP3/YLR375W [Source:SGD;Acc:S000004366]
L	YLR402W	YLR402W	0	nf	1	Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data [Source:SGD;Acc:S000004394]
L	YLR412C-A	YLR412C-A	0	nf	1	Putative protein of unknown function [Source:SGD;Acc:S000028572]
L	YLR428C	YLR428C	3	-1.1	1	Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data; partially overlaps the verified ORF CRN1 [Source:SGD;Acc:S000004420]
L	YLR434C	YLR434C	1	-1.1	1	Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data; partially overlaps the verified ORF TSR2/YLR435W [Source:SGD;Acc:S000004426]
L	YLR437C-A	YLR437C-A	1	-1	1	Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data; partially overlaps the verified ORF CAR2/YLR438W [Source:SGD;Acc:S000028684]
L	YLR461W	PAU4	1	-0.1	1	Member of the seripauperin multigene family encoded mainly in subtelomeric regions; active during alcoholic fermentation, regulated by anaerobiosis, negatively regulated by oxygen, repressed by heme [Source:SGD;Acc:S000004453]
L	YLR466C-A	YLR466C-A	1	-1.8	1	Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data; partially overlaps the verified ORF YRF1-4/YLR466W [Source:SGD;Acc:S000028685]
L	YLR466C-B	YLR466C-B	0	nf	1	Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data [Source:SGD;Acc:S000028686]
L	YLR467C-A	YLR467C-A	1	-1.8	1	Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data; partially overlaps the verified ORF YRF1-4/YLR466W [Source:SGD;Acc:S000028687]
M	YML007C-A	YML007C-A	0	nf	1	Putative protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to mitochondria [Source:SGD;Acc:S000007621]
M	YML031C-A	YML031C-A	1	-1.2	1	Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data; partially overlaps the verified ORF NDC1/YML031W; questionable ORF from MIPS [Source:SGD;Acc:S000028809]
M	YML047W-A	YML047W-A	1	-1.2	1	Dubious open reading frame unlikely to encode a functional protein, based on available experimental and comparative sequence data [Source:SGD;Acc:S000004512]
M	YML057C-A	YML057C-A	9	-1.8	1	Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data; overlaps the verified gene CMP2/YML057W [Source:SGD;Acc:S000004522]
M	YML084W	YML084W	2	-1.6	1	Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data [Source:SGD;Acc:S000004549]
M	YML089C	YML089C	3	-1.3	1	Dubious open reading frame unlikely to encode a functional protein, based on available experimental and comparative sequence data; expression induced by calcium shortage [Source:SGD;Acc:S000004554]
M	YML094C-A	YML094C-A	0	nf	1	Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data; partially overlaps the verified gene GIM5/YML094W; deletion confers sensitivity to GSAO [Source:SGD;Acc:S000004561]
M	YML099W-A	YML099W-A	5	-1.3	1	Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data; partially overlaps the verified ORF ARG81/YML099C [Source:SGD;Acc:S000004567]
M	YML100W-A	YML100W-A	0	nf	1	Putative protein of unknown function; identified by gene-trapping, microarray-based expression analysis, and genome-wide homology searching [Source:SGD;Acc:S000028688]
M	YML116W-A	YML116W-A	2	-1.2	1	Putative protein of unknown function [Source:SGD;Acc:S000004586]
M	YML122C	YML122C	3	-1.6	1	Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data [Source:SGD;Acc:S000004591]
M	YML133W-B	YML133W-B	43	-1.6	1	Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data; completely overlaps the uncharacterized ORF YML133C [Source:SGD;Acc:S000028690]
M	YMR001C-A	YMR001C-A	0	nf	1	Putative protein of unknown function [Source:SGD;Acc:S000028691]
M	YMR013W-A	YMR013W-A	2	-1.3	1	Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data; completely overlaps the characterized snoRNA gene snR73 [Source:SGD;Acc:S000007622]
M	YMR030W-A	YMR030W-A	1	0	1	Putative protein of unknown function [Source:SGD;Acc:S000028574]
M	YMR046W-A	YMR046W-A	0	nf	1	Dubious open reading frame unlikely to encode a functional protein, based on available experimental and comparative sequence data [Source:SGD;Acc:S000007248]
M	YMR057C	YMR057C	1	-1.5	1	Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data; partially overlaps verified ORF AAC1 [Source:SGD;Acc:S000004661]
M	YMR075C-A	YMR075C-A	2	-1.7	1	Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data; completely overlaps the verified ORF RCO1/YMR075W [Source:SGD;Acc:S000004679]
M	YMR105W-A	YMR105W-A	0	nf	1	Putative protein of unknown function [Source:SGD;Acc:S000028692]
M	YMR135W-A	YMR135W-A	2	-1	1	Dubious open reading frame unlikely to encode a functional protein, based on available experimental and comparative sequence data [Source:SGD;Acc:S000004743]
M	YMR141C	YMR141C	5	-1.6	1	Dubious open reading frame unlikely to encode a functional protein, based on available experimental and comparative sequence data [Source:SGD;Acc:S000004749]
M	YMR141W-A	YMR141W-A	0	nf	1	Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data; overlaps the verified gene RPL13B/YMR142C [Source:SGD;Acc:S000028575]
M	YMR151W	YIM2	1	-1.4	1	Dubious open reading frame, unlikely to encode a protein; not conserved in closely related Saccharomyces species; 5% of ORF overlaps the verified gene IMP1 [Source:SGD;Acc:S000004759]
M	YMR153C-A	YMR153C-A	1	-2	1	Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data; partially overlaps the verified gene NUP53 [Source:SGD;Acc:S000004761]
M	YMR175W-A	YMR175W-A	3	-1.3	1	Putative protein of unknown function [Source:SGD;Acc:S000028848]
M	YMR182W-A	YMR182W-A	0	nf	1	Putative protein of unknown function [Source:SGD;Acc:S000028693]
M	YMR193C-A	YMR193C-A	1	-1	1	Dubious open reading frame unlikely to encode a functional protein, based on available experimental and comparative sequence data [Source:SGD;Acc:S000004805]
M	YMR242W-A	YMR242W-A	1	-1.1	1	Putative protein of unknown function [Source:SGD;Acc:S000028694]
M	YMR247W-A	YMR247W-A	0	nf	1	Putative protein of unknown function [Source:SGD;Acc:S000028849]
M	YMR254C	YMR254C	2	-1.4	1	Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data [Source:SGD;Acc:S000004867]
M	YMR272W-A	YMR272W-A	5	-1.6	1	Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data; overlaps the verified gene SCS7/YMR272C [Source:SGD;Acc:S000028695]
M	YMR272W-B	YMR272W-B	0	nf	1	Identified by gene-trapping, microarray-based expression analysis, and genome-wide homology searching [Source:SGD;Acc:S000028696]
M	YMR290W-A	YMR290W-A	0	nf	1	Dubious open reading frame unlikely to encode a functional protein, based on available experimental and comparative sequence data; overlaps 5' end of essential HAS1 gene which encodes an ATP-dependent RNA helicase [Source:SGD;Acc:S000004904]
M	YMR294W-A	YMR294W-A	2	-1.3	1	Dubious open reading frame unlikely to encode a functional protein, substantially overlaps YMR295C; deletion causes sensitivity to unfolded protein response-inducing agents [Source:SGD;Acc:S000004909]
M	YMR316C-A	YMR316C-A	0	nf	1	Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data; completely overlaps the verified gene DIA1/YMR316W [Source:SGD;Acc:S000004933]
M	YMR316C-B	YMR316C-B	1	-1.2	1	Dubious open reading frame unlikely to encode a functional protein, based on available experimental and comparative sequence data [Source:SGD;Acc:S000004934]
M	YMR320W	YMR320W	0	nf	1	Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data [Source:SGD;Acc:S000004939]
M	YMR324C	YMR324C	0	nf	1	Dubious open reading frame unlikely to encode a protein, based on experimental and comparative sequence data; transcription is AZF1 dependent in glycerol-lactate medium and SLT2 dependent in response to the lipid hydroperoxides [Source:SGD;Acc:S000004943]
M	YMR326C	YMR326C	0	nf	1	Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data; overlaps the telomere on the right arm of chromosome 13 [Source:SGD;Acc:S000004945]
N	YNL013C	YNL013C	2	-1.8	1	Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data; partially overlaps the verified ORF HEF3/YNL014W [Source:SGD;Acc:S000004958]
N	YNL017C	YNL017C	4	-1.5	1	Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data; completely overlaps the tRNA ORF tI(AAU)N2 [Source:SGD;Acc:S000004962]
N	YNL028W	YNL028W	1	0	1	Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data [Source:SGD;Acc:S000004973]
N	YNL043C	YNL043C	1	0	1	Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data; partially overlaps the verified gene YIP3/YNL044W [Source:SGD;Acc:S000004988]
N	YNL067W-A	YNL067W-A	2	-1.2	1	Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data [Source:SGD;Acc:S000007623]
N	YNL067W-B	YNL067W-B	0	nf	1	Putative protein of unknown function [Source:SGD;Acc:S000028810]
N	YNL097C-B	YNL097C-B	0	nf	1	Putative protein of unknown function [Source:SGD;Acc:S000028699]
N	YNL097W-A	YNL097W-A	2	-1.4	1	Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data; completely overlaps the verified gene PHO23/YNL097C [Source:SGD;Acc:S000028700]
N	YNL103W-A	YNL103W-A	0	nf	1	Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data; partially overlaps the verified gene MET4/YNL104C [Source:SGD;Acc:S000028701]
N	YNL105W	RRT16	0	nf	1	Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data; partially overlaps verified gene INP52; identified in a screen for mutants with decreased levels of rDNA transcription [Source:SGD;Acc:S000005049]
N	YNL109W	YNL109W	0	nf	1	Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data; partially overlaps the uncharacterized ORF YNL108C [Source:SGD;Acc:S000005053]
N	YNL114C	YNL114C	0	nf	1	Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data; completely overlaps the verified ORF RPC19/YNL113W, an RNA polymerase subunit [Source:SGD;Acc:S000005058]
N	YNL144W-A	YNL144W-A	0	nf	1	Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data; partially overlaps the uncharacterized gene YNL144C [Source:SGD;Acc:S000028702]
N	YNL150W	YNL150W	6	-2	1	Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data; extensive overlap with PGA2/YNL149C, an uncharacterized gene with a proposed role in protein trafficking [Source:SGD;Acc:S000005094]
N	YNL171C	YNL171C	2	-1.2	1	Dubious open reading frame unlikely to encode a functional protein, based on available experimental and comparative sequence data [Source:SGD;Acc:S000005115]
N	YNL174W	YNL174W	0	nf	1	Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data; overlaps the verified gene NOP13/YNL175C [Source:SGD;Acc:S000005118]
N	YNL179C	YNL179C	4	-0.5	1	Dubious open reading frame, unlikely to encode a protein; not conserved in closely related Saccharomyces species; deletion in cyr1 mutant results in loss of stress resistance [Source:SGD;Acc:S000005123]
N	YNL203C	YNL203C	1	-2	1	Dubious open reading frame unlikely to encode a functional protein, based on available experimental and comparative sequence data [Source:SGD;Acc:S000005147]
N	YNL205C	YNL205C	1	-1.3	1	Dubious ORF unlikely to encode a functional protein, based on available experimental and comparative sequence data [Source:SGD;Acc:S000005149]
N	YNL266W	YNL266W	0	nf	1	Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data; partially overlaps the verified ORF IST1/YNL265C [Source:SGD;Acc:S000005210]
N	YNL285W	YNL285W	1	-1	1	Dubious open reading frame unlikely to encode a functional protein, based on available experimental and comparative sequence data [Source:SGD;Acc:S000005229]
N	YNL296W	YNL296W	2	-1.5	1	Dubious open reading frame unlikely to encode a functional protein; deletion adversely affects sporulation; deletion mutant exhibits synthetic phenotype under expression of mutant huntingtin fragment, but gene does not have human ortholog [Source:SGD;Acc:S000005240]
N	YNL303W	YNL303W	0	nf	1	Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data [Source:SGD;Acc:S000005247]
N	YNL319W	YNL319W	2	-1.4	1	Dubious open reading frame unlikely to encode a protein; partially overlaps the verified gene HXT14 [Source:SGD;Acc:S000005263]
N	YNL324W	YNL324W	2	-1.7	1	Dubious ORF unlikely to encode a functional protein, based on available experimental and comparative sequence data [Source:SGD;Acc:S000005268]
N	YNL337W	YNL337W	0	nf	1	Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data [Source:SGD;Acc:S000005281]
N	YNL338W	YNL338W	0	nf	1	Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data; completely overlaps TEL14L-XC, which is Telomeric X element Core sequence on the left arm of Chromosome XIV [Source:SGD;Acc:S000005282]
N	YNL339W-B	YNL339W-B	43	-1.6	1	Identified by gene-trapping, microarray-based expression analysis, and genome-wide homology searching [Source:SGD;Acc:S000028704]
N	YNR005C	YNR005C	1	-1.6	1	Dubious open reading frame unlikely to encode a functional protein, based on available experimental and comparative sequence data [Source:SGD;Acc:S000005288]
N	YNR025C	YNR025C	0	nf	1	Dubious open reading frame unlikely to encode a functional protein, based on available experimental and comparative sequence data; deletion reduces expression of PIS1 gene encoding phosphatidylinositol synthase [Source:SGD;Acc:S000005308]
N	YNR044W	AGA1	2	-1.4	1	Anchorage subunit of a-agglutinin of a-cells, highly O-glycosylated protein with N-terminal secretion signal and C-terminal signal for addition of GPI anchor to cell wall, linked to adhesion subunit Aga2p via two disulfide bonds [Source:SGD;Acc:S000005327]
N	YNR076W	PAU6	0	nf	1	Member of the seripauperin multigene family encoded mainly in subtelomeric regions, active during alcoholic fermentation, regulated by anaerobiosis, negatively regulated by oxygen, repressed by heme; identical to Pau18p [Source:SGD;Acc:S000005359]
N	YNR077C	YNR077C	1	-1.6	1	Protein of unknown function, abundance changes with carbon source [Source:SGD;Acc:S000005360]
O	YOL013W-A	YOL013W-A	3	-1.8	1	Putative protein of unknown function; identified by SAGE [Source:SGD;Acc:S000028811]
O	YOL013W-B	YOL013W-B	0	nf	1	Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data; completely overlaps the long terminal repeat (LTR) of a Ty1 element [Source:SGD;Acc:S000007252]
O	YOL019W-A	YOL019W-A	2	-1.3	1	Identified by gene-trapping, microarray-based expression analysis, and genome-wide homology searching [Source:SGD;Acc:S000028707]
O	YOL024W	YOL024W	2	-1.8	1	Putative protein of unknown function; predicted to have thiol-disulfide oxidoreductase active site [Source:SGD;Acc:S000005384]
O	YOL035C	YOL035C	0	nf	1	Dubious open reading frame unlikely to encode a functional protein, based on available experimental and comparative sequence data [Source:SGD;Acc:S000005395]
O	YOL037C	YOL037C	3	-1.1	1	Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data; partially overlaps the uncharacterized ORF YOL036W [Source:SGD;Acc:S000005397]
O	YOL038C-A	YOL038C-A	2	-1.4	1	Putative protein of unknown function; identified by SAGE analysis [Source:SGD;Acc:S000028812]
O	YOL046C	YOL046C	8	-1.9	1	Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data;almost completely overlaps the verified gene PSK2/YOL045W [Source:SGD;Acc:S000005406]
O	YOL050C	YOL050C	0	nf	1	Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data; overlaps verified gene GAL11; deletion confers sensitivity to 4-(N-(S-glutathionylacetyl)amino) phenylarsenoxide (GSAO) [Source:SGD;Acc:S000005410]
O	YOL052C-A	DDR2	2	-9.5	1	Multistress response protein, expression is activated by a variety of xenobiotic agents and environmental or physiological stresses [Source:SGD;Acc:S000005413]
O	YOL083C-A	YOL083C-A	1	-1.2	1	Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data; identified by expression profiling and mass spectrometry [Source:SGD;Acc:S000028853]
O	YOL085W-A	YOL085W-A	2	-1.1	1	Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data; partially overlaps the dubious ORF YOL085C [Source:SGD;Acc:S000028708]
O	YOL097W-A	YOL097W-A	2	-1.4	1	Putative protein of unknown function; identified by expression profiling and mass spectrometry [Source:SGD;Acc:S000028854]
O	YOL099C	YOL099C	8	-1.6	1	Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data; partially overlaps verified gene PKH2/YOL100W; may interact with ribosomes [Source:SGD;Acc:S000005459]
O	YOL106W	YOL106W	1	-1.2	1	Dubious open reading frame unlikely to encode a functional protein, based on available experimental and comparative sequence data [Source:SGD;Acc:S000005466]
O	YOL118C	YOL118C	2	-1.4	1	Dubious open reading frame unlikely to encode a functional protein, based on available experimental and comparative sequence data [Source:SGD;Acc:S000005478]
O	YOL131W	YOL131W	1	-1.7	1	Putative protein of unknown function [Source:SGD;Acc:S000005491]
O	YOL134C	YOL134C	1	-1.1	1	Dubious open reading frame unlikely to encode a protein, based on experimental and comparative sequence data; partially overlaps HRT1, a verified gene that encodes an SCF ubiquitin ligase subunit [Source:SGD;Acc:S000005494]
O	YOL150C	YOL150C	0	nf	1	Dubious open reading frame unlikely to encode a functional protein, based on available experimental and comparative sequence data [Source:SGD;Acc:S000005510]
O	YOL155W-A	YOL155W-A	0	nf	1	Putative protein of unknown function; identified by expression profiling and mass spectrometry [Source:SGD;Acc:S000028855]
O	YOL160W	YOL160W	0	nf	1	Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data [Source:SGD;Acc:S000005520]
O	YOL161C	PAU20	1	0	1	Protein of unknown function, member of the seripauperin multigene family encoded mainly in subtelomeric regions; expression induced by low temperature and also by anaerobic conditions; induced during alcoholic fermentation [Source:SGD;Acc:S000005521]
O	YOL163W	YOL163W	5	-1.7	1	Putative protein of unknown function; member of the Dal5p subfamily of the major facilitator family [Source:SGD;Acc:S000005523]
O	YOL164W-A	YOL164W-A	0	nf	1	Putative protein of unknown function; identified by fungal homology and RT-PCR [Source:SGD;Acc:S000028580]
O	YOL165C	AAD15	6	-1.9	1	Putative aryl-alcohol dehydrogenase; similar to P. chrysosporium aryl-alcohol dehydrogenase; mutational analysis has not yet revealed a physiological role [Source:SGD;Acc:S000005525]
O	YOL166C	YOL166C	1	-1.1	1	Dubious open reading frame unlikely to encode a functional protein, based on available experimental and comparative sequence data [Source:SGD;Acc:S000005526]
O	YOL166W-A	YOL166W-A	4	-1.1	1	Identified by gene-trapping, microarray-based expression analysis, and genome-wide homology searching [Source:SGD;Acc:S000028709]
O	YOR008W-B	YOR008W-B	0	nf	1	Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data [Source:SGD;Acc:S000007628]
O	YOR011W-A	YOR011W-A	0	nf	1	Putative protein of unknown function [Source:SGD;Acc:S000028581]
O	YOR012W	YOR012W	1	-1.3	1	Putative protein of unknown function [Source:SGD;Acc:S000005538]
O	YOR015W	YOR015W	3	-0.5	1	Dubious open reading frame unlikely to encode a functional protein, based on available experimental and comparative sequence data [Source:SGD;Acc:S000005541]
O	YOR024W	YOR024W	1	0	1	Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data [Source:SGD;Acc:S000005550]
O	YOR029W	YOR029W	0	nf	1	Dubious open reading frame unlikely to encode a functional protein, based on available experimental and comparative sequence data [Source:SGD;Acc:S000005555]
O	YOR032W-A	YOR032W-A	0	nf	1	Identified by gene-trapping, microarray-based expression analysis, and genome-wide homology searching [Source:SGD;Acc:S000028710]
O	YOR034C-A	YOR034C-A	3	-1.9	1	Putative protein of unknown function; identified by expression profiling and mass spectrometry [Source:SGD;Acc:S000028856]
O	YOR041C	YOR041C	2	0	1	Dubious open reading frame, unlikely to encode a protein; not conserved in closely related Saccharomyces species; 85% of ORF overlaps the uncharacterized gene CUE5; deletion in cyr1 mutant results in loss of stress resistance [Source:SGD;Acc:S000005567]
O	YOR055W	YOR055W	5	-1.8	1	Dubious open reading frame unlikely to encode a functional protein, based on available experimental and comparative sequence data [Source:SGD;Acc:S000005581]
O	YOR068C	VAM10	4	-1.5	1	Protein involved in vacuole morphogenesis; acts at an early step of homotypic vacuole fusion that is required for vacuole tethering [Source:SGD;Acc:S000005594]
O	YOR072W	YOR072W	1	-1.4	1	Dubious open reading frame unlikely to encode a protein, based on experimental and comparative sequence data; partially overlaps the dubious gene YOR072W-A; diploid deletion strains are methotrexate, paraquat and wortmannin sensitive [Source:SGD;Acc:S000005598]
O	YOR082C	YOR082C	2	-1.6	1	Dubious open reading frame unlikely to encode a protein, based on experimental and comparative sequence data; partially overlaps the verified gene YOR083W [Source:SGD;Acc:S000005608]
O	YOR108C-A	YOR108C-A	0	nf	1	Identified by gene-trapping, microarray-based expression analysis, and genome-wide homology searching [Source:SGD;Acc:S000028711]
O	YOR121C	YOR121C	2	-1.7	1	Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data; open reading frame overlaps the verified gene GCY1/YOR120W [Source:SGD;Acc:S000005647]
O	YOR135C	IRC14	10	-1.3	1	Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data; partially overlaps the verified gene YOR136W; null mutant displays increased levels of spontaneous Rad52 foci [Source:SGD;Acc:S000005661]
O	YOR139C	YOR139C	2	-1.3	1	Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data; partially overlaps the verified ORF SFL1/YOR140W [Source:SGD;Acc:S000005665]
O	YOR161C-C	YOR161C-C	0	nf	1	Identified by gene-trapping, microarray-based expression analysis, and genome-wide homology searching [Source:SGD;Acc:S000028712]
O	YOR161W-A	YOR161W-A	1	-1.3	1	Identified by gene-trapping, microarray-based expression analysis, and genome-wide homology searching [Source:SGD;Acc:S000028713]
O	YOR183W	FYV12	5	-1.2	1	Protein of unknown function, required for survival upon exposure to K1 killer toxin [Source:SGD;Acc:S000005709]
O	YOR186C-A	YOR186C-A	2	-1.1	1	Identified by gene-trapping, microarray-based expression analysis, and genome-wide homology searching [Source:SGD;Acc:S000028715]
O	YOR192C-C	YOR192C-C	3	-1.2	1	Putative protein of unknown function; identified by expression profiling and mass spectrometry [Source:SGD;Acc:S000028857]
O	YOR199W	YOR199W	1	-1.6	1	Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data [Source:SGD;Acc:S000005725]
O	YOR200W	YOR200W	10	-1.6	1	Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data; partially overlaps the verified ORF MRM1/YOR201c [Source:SGD;Acc:S000005726]
O	YOR218C	YOR218C	0	nf	1	Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data; open reading frame overlaps the verified gene RFC1/YOR217W [Source:SGD;Acc:S000005744]
O	YOR235W	IRC13	0	nf	1	Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data; null mutant displays increased levels of spontaneous Rad52 foci [Source:SGD;Acc:S000005761]
O	YOR268C	YOR268C	0	nf	1	Putative protein of unknown function; sporulation is abnormal in homozygous diploid; YOR268C is not an essential gene [Source:SGD;Acc:S000005794]
O	YOR277C	YOR277C	0	nf	1	Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data; almost completely overlaps the verified gene CAF20 [Source:SGD;Acc:S000005803]
O	YOR282W	YOR282W	2	-1.2	1	Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data; partially overlaps essential, verified gene PLP2/YOR281C [Source:SGD;Acc:S000005808]
O	YOR302W	YOR302W	0	nf	1	CPA1 uORF, Arginine attenuator peptide, regulates translation of the CPA1 mRNA [Source:SGD;Acc:S000005828]
O	YOR314W	YOR314W	3	-1.6	1	Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data [Source:SGD;Acc:S000005841]
O	YOR314W-A	YOR314W-A	0	nf	1	Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data [Source:SGD;Acc:S000007629]
O	YOR318C	YOR318C	5	-1.5	1	Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data; transcript is predicted to be spliced but there is no evidence that it is spliced in vivo [Source:SGD;Acc:S000005845]
O	YOR335W-A	YOR335W-A	1	-1.3	1	Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data; partially overlaps the verified gene ALA1/YOR335C [Source:SGD;Acc:S000028717]
O	YOR376W-A	YOR376W-A	0	nf	1	Putative protein of unknown function; identified by fungal homology and RT-PCR [Source:SGD;Acc:S000028586]
O	YOR394C-A	YOR394C-A	0	nf	1	Identified by gene-trapping, microarray-based expression analysis, and genome-wide homology searching [Source:SGD;Acc:S000028718]
O	YOR396C-A	YOR396C-A	1	-1.8	1	Identified by gene-trapping, microarray-based expression analysis, and genome-wide homology searching [Source:SGD;Acc:S000028719]
P	YPL035C	YPL035C	0	nf	1	Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data; partially overlaps the uncharacterized gene YPL034W; YPL035C is not an essential gene [Source:SGD;Acc:S000005956]
P	YPL038W-A	YPL038W-A	1	-1.6	1	Putative protein of unknown function; identified by fungal homology and RT-PCR [Source:SGD;Acc:S000028588]
P	YPL056C	LCL1	0	nf	1	Putative protein of unknown function; deletion mutant is fluconazole resistant and has long chronological lifespan [Source:SGD;Acc:S000005977]
P	YPL096C-A	ERI1	0	nf	1	Endoplasmic reticulum membrane protein that binds to and inhibits GTP-bound Ras2p at the ER; component of the GPI-GnT complex which catalyzes the first step in GPI-anchor biosynthesis; probable homolog of mammalian PIG-Y protein [Source:SGD;Acc:S000028423]
P	YPL102C	YPL102C	4	-1.4	1	Dubious open reading frame, not conserved in closely related Saccharomyces species; deletion mutation enhances replication of Brome mosaic virus in S. cerevisiae, but this is likely due to effects on the overlapping gene ELP4 [Source:SGD;Acc:S000006023]
P	YPL114W	YPL114W	0	nf	1	Dubious open reading frame, unlikely to encode a functional protein; largely overlaps ORF YPL113C; diploid deletion in BY4743 strain background exhibits high budding index [Source:SGD;Acc:S000006035]
P	YPL135C-A	YPL135C-A	0	nf	1	Identified by gene-trapping, microarray-based expression analysis, and genome-wide homology searching [Source:SGD;Acc:S000028720]
P	YPL142C	YPL142C	0	nf	1	Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data; completely overlaps the verified ORF RPL33A/YPL143W, a component of the large (60S) ribosomal subunit [Source:SGD;Acc:S000006063]
P	YPL152W-A	YPL152W-A	0	nf	1	Identified by gene-trapping, microarray-based expression analysis, and genome-wide homology searching [Source:SGD;Acc:S000028721]
P	YPL182C	YPL182C	7	-3.2	1	Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data; partially overlaps the verified gene CTI6/YPL181W [Source:SGD;Acc:S000006103]
P	YPL185W	YPL185W	5	-1.4	1	Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data; partially overlaps the verified gene UIP4/YPL186C [Source:SGD;Acc:S000006106]
P	YPL189C-A	COA2	0	nf	1	Cytochrome oxidase assembly factor; null mutation results in respiratory deficiency with specific loss of cytochrome oxidase activity; functions downstream of assembly factors Mss51p and Coa1p and interacts with assembly factor Shy1p [Source:SGD;Acc:S000028527]
P	YPL205C	YPL205C	4	-1.9	1	Hypothetical protein; deletion of locus affects telomere length [Source:SGD;Acc:S000006126]
P	YPL222C-A	YPL222C-A	0	nf	1	Identified by gene-trapping, microarray-based expression analysis, and genome-wide homology searching [Source:SGD;Acc:S000028722]
P	YPL238C	YPL238C	1	-0.7	1	Dubious open reading frame unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps 5' end of the verified essential gene SUI3/YPL237W [Source:SGD;Acc:S000006159]
P	YPL251W	YPL251W	0	nf	1	Dubious open reading frame unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps 5' end of the verified, essential gene YAH1/YPL252C [Source:SGD;Acc:S000006172]
P	YPL283W-B	YPL283W-B	1	-1.8	1	Identified by gene-trapping, microarray-based expression analysis, and genome-wide homology searching [Source:SGD;Acc:S000028724]
P	YPR002C-A	YPR002C-A	1	-1.5	1	Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data; completely overlaps the Ty1 long terminal repeat, YPRWdelta12 [Source:SGD;Acc:S000007254]
P	YPR012W	YPR012W	0	nf	1	Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data; YPR012W is not an essential gene [Source:SGD;Acc:S000006216]
P	YPR014C	YPR014C	2	-1.3	1	Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data; YPR014C is not an essential gene [Source:SGD;Acc:S000006218]
P	YPR016W-A	YPR016W-A	0	nf	1	Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data [Source:SGD;Acc:S000007630]
P	YPR038W	IRC16	3	-2	1	Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data; partially overlaps verified gene YPR037C; null mutant displays increased levels of spontaneous Rad52p foci [Source:SGD;Acc:S000006242]
P	YPR044C	OPI11	2	-2.7	1	Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data; partially overlaps verified gene RPL43A/YPR043W; deletion confers sensitivity to GSAO [Source:SGD;Acc:S000006248]
P	YPR064W	YPR064W	2	-1.1	1	Dubious open reading frame unlikely to encode a functional protein, based on available experimental and comparative sequence data [Source:SGD;Acc:S000006268]
P	YPR076W	YPR076W	0	nf	1	Dubious open reading frame unlikely to encode a functional protein, based on available experimental and comparative sequence data [Source:SGD;Acc:S000006280]
P	YPR087W	VPS69	0	nf	1	Dubious open reading frame, unlikely to encode a protein; not conserved in closely related Saccharomyces species; 85% of ORF overlaps the verified gene SRP54; deletion causes a vacuolar protein sorting defect [Source:SGD;Acc:S000006291]
P	YPR092W	YPR092W	3	-1.6	1	Dubious open reading frame unlikely to encode a functional protein, based on available experimental and comparative sequence data [Source:SGD;Acc:S000006296]
P	YPR096C	YPR096C	2	-1.6	1	Protein of unknown function that may interact with ribosomes, based on co-purification experiments [Source:SGD;Acc:S000006300]
P	YPR099C	YPR099C	0	nf	1	Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data; partially overlaps the verified gene MRPL51/YPR100W [Source:SGD;Acc:S000006303]
P	YPR123C	YPR123C	0	nf	1	Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data; partially/completely overlaps the verified ORF CTR [Source:SGD;Acc:S000006327]
P	YPR126C	YPR126C	11	-1.9	1	Dubious open reading frame unlikely to encode a functional protein, based on available experimental and comparative sequence data [Source:SGD;Acc:S000006330]
P	YPR130C	YPR130C	2	-1.2	1	Dubious open reading frame unlikely to encode a functional protein, based on available experimental and comparative sequence data [Source:SGD;Acc:S000006334]
P	YPR136C	YPR136C	3	-3.2	1	Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data; partially overlaps verified ORF RRP9 [Source:SGD;Acc:S000006340]
P	YPR146C	YPR146C	2	-1.4	1	Dubious open reading frame unlikely to encode a functional protein, based on available experimental and comparative sequence data [Source:SGD;Acc:S000006350]
P	YPR150W	YPR150W	3	-1.7	1	Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data; partially overlaps the verified gene SUE1/YPR151C [Source:SGD;Acc:S000006354]
P	YPR160C-A	YPR160C-A	4	-1.6	1	Identified by gene-trapping, microarray-based expression analysis, and genome-wide homology searching [Source:SGD;Acc:S000028726]
P	YPR170C	YPR170C	0	nf	1	Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data; partially overlaps the dubious ORFs YPR169W-A and YPR170W-B [Source:SGD;Acc:S000006374]
P	YPR170W-A	YPR170W-A	0	nf	1	Dubious open reading frame unlikely to encode a functional protein, based on available experimental and comparative sequence data; identified by expression profiling and mass spectrometry [Source:SGD;Acc:S000028861]
P	YPR204C-A	YPR204C-A	1	-1.8	1	Identified by gene-trapping, microarray-based expression analysis, and genome-wide homology searching [Source:SGD;Acc:S000028727]
Q	Q0010	Q0010	0	nf	1	Dubious mitochondrial open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data; partially overlaps the dubious ORF Q0017 [Source:SGD;Acc:S000007257]
Q	Q0017	Q0017	0	nf	1	Dubious mitochondrial open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data; partially overlaps the dubious ORF Q0010 [Source:SGD;Acc:S000007258]
Q	Q0032	Q0032	3	-1.1	1	Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data [Source:SGD;Acc:S000007259]
Q	Q0080	ATP8	0	nf	1	Subunit 8 of the F0 sector of mitochondrial inner membrane F1-F0 ATP synthase, encoded on the mitochondrial genome; ATP8 and ATP6 mRNAs are not translated in the absence of the F1 sector of ATPase [Source:SGD;Acc:S000007267]
Q	Q0092	Q0092	0	nf	1	Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data [Source:SGD;Acc:S000007269]
Q	Q0142	Q0142	0	nf	1	Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data; partially overlaps dubious open reading frame Q0143 [Source:SGD;Acc:S000007276]
Q	Q0143	Q0143	0	nf	1	Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data [Source:SGD;Acc:S000007277]
Q	Q0144	Q0144	0	nf	1	Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data [Source:SGD;Acc:S000007278]
Q	Q0182	Q0182	1	-1.7	1	Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data [Source:SGD;Acc:S000007280]