Chr	ORF	Gene	Observations	Best log(e)	EC	Description
A	YAL018C	LDS1	12	-28.7	2	Putative protein of unknown function [Source:SGD;Acc:S000000016]
A	YAL026C-A	YAL026C-A	6	-2.8	2	Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data; partially overlaps the uncharacterized ORF YAL027W and the verified gene DRS2 [Source:SGD;Acc:S000028730]
A	YAL037C-A	YAL037C-A	3	-5.4	2	Putative protein of unknown function [Source:SGD;Acc:S000028732]
A	YAL037W	YAL037W	19	-4.9	2	Putative protein of unknown function [Source:SGD;Acc:S000000035]
A	YAL042C-A	YAL042C-A	8	-2.3	2	Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data; partially overlaps verified ORF ERV46/YAL042W; YAL042C-A is a non-essential gene [Source:SGD;Acc:S000002138]
A	YAL056C-A	YAL056C-A	8	-10.4	2	Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data [Source:SGD;Acc:S000002139]
A	YAL059C-A	YAL059C-A	5	-2.5	2	Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data; partially overlaps verified gene ECM1/YAL059W [Source:SGD;Acc:S000028734]
A	YAL063C	FLO9	11	-9.3	2	Lectin-like protein with similarity to Flo1p, thought to be expressed and involved in flocculation [Source:SGD;Acc:S000000059]
A	YAL063C-A	YAL063C-A	5	-3.3	2	Putative protein of unknown function; identified by expression profiling and mass spectrometry [Source:SGD;Acc:S000028813]
A	YAL065C	YAL065C	3	-2.2	2	Putative protein of unknown function; has homology to FLO1; possible pseudogene [Source:SGD;Acc:S000001817]
A	YAL066W	YAL066W	18	-28	2	Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data [Source:SGD;Acc:S000000061]
A	YAL067W-A	YAL067W-A	15	-14.8	2	Putative protein of unknown function; identified by gene-trapping, microarray-based expression analysis, and genome-wide homology searching [Source:SGD;Acc:S000028593]
A	YAR020C	PAU7	7	-2.2	2	Member of the seripauperin multigene family, active during alcoholic fermentation, regulated by anaerobiosis, inhibited by oxygen, repressed by heme [Source:SGD;Acc:S000000073]
A	YAR023C	YAR023C	3	-11.3	2	Putative integral membrane protein, member of DUP240 gene family [Source:SGD;Acc:S000000074]
A	YAR035C-A	YAR035C-A	2	-2.6	2	Putative protein of unknown function; identified by gene-trapping, microarray-based expression analysis, and genome-wide homology searching; predicted to have a role in cell budding based on computational guilt by association analysis [Source:SGD;Acc:S000028595]
A	YAR053W	YAR053W	4	-5.3	2	Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data [Source:SGD;Acc:S000000085]
A	YAR060C	YAR060C	5	-2.1	2	Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data [Source:SGD;Acc:S000000086]
A	YAR068W	YAR068W	7	-2.1	2	Fungal-specific protein of unknown function; induced in respiratory-deficient cells [Source:SGD;Acc:S000000091]
A	YAR070C	YAR070C	1	-2.1	2	Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data [Source:SGD;Acc:S000000093]
B	YBL008W-A	YBL008W-A	47	-4.5	2	Putative protein of unknown function; identified by fungal homology and RT-PCR [Source:SGD;Acc:S000028529]
B	YBL012C	YBL012C	2	-2.1	2	Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data [Source:SGD;Acc:S000000108]
B	YBL029W	YBL029W	18	-67.9	2	Non-essential protein of unknown function [Source:SGD;Acc:S000000125]
B	YBL043W	ECM13	9	-14.6	2	Non-essential protein of unknown function; induced by treatment with 8-methoxypsoralen and UVA irradiation [Source:SGD;Acc:S000000139]
B	YBL065W	YBL065W	4	-2.7	2	Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data; partially overlaps verified ORF SEF1/YBL066C; YBL065W is a non-essential gene [Source:SGD;Acc:S000000161]
B	YBL071C	YBL071C	3	-2.2	2	Dubious open reading frame, predicted protein contains a peroxisomal targeting signal [Source:SGD;Acc:S000000167]
B	YBL073W	YBL073W	10	-2.5	2	Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data; partially overlaps the essential gene AAR2/YBL074C [Source:SGD;Acc:S000000169]
B	YBL077W	YBL077W	5	-2.3	2	Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data; partially overlaps the verified gene ILS1/YBL076C [Source:SGD;Acc:S000000173]
B	YBL096C	YBL096C	1	-2.1	2	Non-essential protein of unknown function [Source:SGD;Acc:S000000192]
B	YBL108W	YBL108W	8	-3	2	Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data [Source:SGD;Acc:S000000204]
B	YBR008C	FLR1	7	-59.7	2	Plasma membrane multidrug transporter of the major facilitator superfamily, involved in efflux of fluconazole, diazaborine, benomyl, methotrexate, and other drugs; expression induced in cells treated with the mycotoxin patulin [Source:SGD;Acc:S000000212]
B	YBR013C	YBR013C	2	-5.2	2	Putative protein of unknown function, haploid deletion mutant exhibits synthetic phenotype with alpha-synuclein [Source:SGD;Acc:S000000217]
B	YBR027C	YBR027C	3	-2.2	2	Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data [Source:SGD;Acc:S000000231]
B	YBR045C	GIP1	9	-9	2	Meiosis-specific regulatory subunit of the Glc7p protein phosphatase, regulates spore wall formation and septin organization, required for expression of some late meiotic genes and for normal localization of Glc7p [Source:SGD;Acc:S000000249]
B	YBR051W	YBR051W	8	-2.4	2	Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data; partiallly overlaps the REG2/YBR050C regulatory subunit of the Glc7p type-1 protein phosphatase [Source:SGD;Acc:S000000255]
B	YBR056W-A	YBR056W-A	3	-22.3	2	Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data; partially overlaps the dubious ORF YBR056C-B [Source:SGD;Acc:S000028736]
B	YBR063C	YBR063C	17	-3.7	2	Putative protein of unknown function; YBR063C is not an essential gene [Source:SGD;Acc:S000000267]
B	YBR072C-A	YBR072C-A	13	-16.7	2	Putative protein of unknown function; identified by fungal homology and RT-PCR [Source:SGD;Acc:S000028532]
B	YBR076W	ECM8	9	-5.2	2	Non-essential protein of unknown function [Source:SGD;Acc:S000000280]
B	YBR089W	YBR089W	12	-3.3	2	Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data; almost completely overlaps the verified gene POL30 [Source:SGD;Acc:S000000293]
B	YBR090C	YBR090C	9	-2.2	2	Putative protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm and nucleus [Source:SGD;Acc:S000000294]
B	YBR109W-A	YBR109W-A	4	-3.8	2	Putative protein of unknown function; questionable ORF from MIPS [Source:SGD;Acc:S000028737]
B	YBR113W	YBR113W	5	-16.5	2	Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data; partially overlaps the verified gene CYC8 [Source:SGD;Acc:S000000317]
B	YBR116C	YBR116C	10	-2.4	2	Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data; partially overlaps the verified gene TKL2 [Source:SGD;Acc:S000000320]
B	YBR124W	YBR124W	8	-3.5	2	Putative protein of unknown function [Source:SGD;Acc:S000000328]
B	YBR138C	YBR138C	54	-26.2	2	Cytoplasmic protein of unknown function, potentially phosphorylated by Cdc28p; YBR138C is not an essential gene [Source:SGD;Acc:S000000342]
B	YBR141W-A	YBR141W-A	2	-2.8	2	Dubious ORF unlikely to encode a protein, based on available experimental and comparative sequence data; overlaps the uncharacterized ORF YBR141C; identified by gene-trapping, microarray analysis, and genome-wide homology searching [Source:SGD;Acc:S000028602]
B	YBR147W	RTC2	3	-5.4	2	Protein of unknown function; mutant produces large lipid droplets, is resistant to fluconazole, has decreased levels of rDNA transcription, growth defects on minimal media, and suppresses cdc13-1; detected in highly purified mitochondria; similar to  rotein coupled receptor from S. pombe [Source:SGD;Acc:S000000351]
B	YBR165W	UBS1	4	-5.6	2	Ubiquitin-conjugating enzyme suppressor that functions as a general positive regulator of Cdc34p activity; nuclear protein that may represent a link between nucleocytoplasmic transport and ubiquitin ligase activity [Source:SGD;Acc:S000000369]
B	YBR180W	DTR1	14	-2.4	2	Putative dityrosine transporter, required for spore wall synthesis; expressed during sporulation; member of the major facilitator superfamily (DHA1 family) of multidrug resistance transporters [Source:SGD;Acc:S000000384]
B	YBR182C	SMP1	18	-24.2	2	Putative transcription factor involved in regulating the response to osmotic stress; member of the MADS-box family of transcription factors [Source:SGD;Acc:S000000386]
B	YBR184W	YBR184W	29	-12.6	2	Putative protein of unknown function; YBR184W is not an essential gene [Source:SGD;Acc:S000000388]
B	YBR186W	PCH2	30	-13.6	2	Nucleolar component of the pachytene checkpoint, which prevents chromosome segregation when recombination and chromosome synapsis are defective; also represses meiotic interhomolog recombination in the rDNA [Source:SGD;Acc:S000000390]
B	YBR190W	YBR190W	6	-2.1	2	Dubious open reading frame unlikely to encode a protein, based on experimental and comparative sequence data; partially overlaps the verified ribosomal protein gene RPL21A/YBR191W [Source:SGD;Acc:S000000394]
B	YBR191W-A	YBR191W-A	2	-2.8	2	Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data [Source:SGD;Acc:S000007594]
B	YBR196C-A	YBR196C-A	1	-2	2	Putative protein of unknown function; identified by fungal homology and RT-PCR [Source:SGD;Acc:S000028534]
B	YBR196C-B	YBR196C-B	5	-5.9	2	Putative protein of unknown function; identified by expression profiling and mass spectrometry [Source:SGD;Acc:S000028816]
B	YBR201C-A	YBR201C-A	2	-13.9	2	Putative protein of unknown function [Source:SGD;Acc:S000087085]
B	YBR209W	YBR209W	2	-12	2	Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data; YBR209W is not an essential gene [Source:SGD;Acc:S000000413]
B	YBR224W	YBR224W	3	-2.1	2	Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data; partially overlaps the verified gene TDP1 [Source:SGD;Acc:S000000428]
B	YBR226C	YBR226C	4	-2.3	2	Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data; partially overlaps the uncharacterized ORF YBR225W [Source:SGD;Acc:S000000430]
B	YBR228W	SLX1	8	-39	2	Subunit of a complex, with Slx4p, that hydrolyzes 5' branches from duplex DNA in response to stalled or converging replication forks; function overlaps with that of Sgs1p-Top3p [Source:SGD;Acc:S000000432]
B	YBR240C	THI2	8	-6.6	2	Transcriptional activator of thiamine biosynthetic genes; interacts with regulatory factor Thi3p to control expression of thiamine biosynthetic genes with respect to thiamine availability; acts together with Pdc2p to respond to thiaminediphosphate d   possibly as related to carbon source availability; zinc finger protein of the Zn(II)2Cys6 type [Source:SGD;Acc:S000000444]
B	YBR250W	SPO23	21	-12.3	2	Protein of unknown function; associates with meiosis-specific protein Spo1p [Source:SGD;Acc:S000000454]
B	YBR259W	YBR259W	38	-15.7	2	Putative protein of unknown function; YBR259W is not an essential gene [Source:SGD;Acc:S000000463]
B	YBR284W	YBR284W	17	-10.1	2	Putative protein of unknown function; YBR284W is not an essential gene; null mutant exhibits decreased resistance to rapamycin and wortmannin and synthetic phenotype with alpha-synuclein [Source:SGD;Acc:S000000488]
B	YBR293W	VBA2	8	-10.6	2	Permease of basic amino acids in the vacuolar membrane [Source:SGD;Acc:S000000497]
B	YBR294W	SUL1	64	-70.3	2	High affinity sulfate permease of the SulP anion transporter family; sulfate uptake is mediated by specific sulfate transporters Sul1p and Sul2p, which control the concentration of endogenous activated sulfate intermediates [Source:SGD;Acc:S000000498]
B	YBR295W	PCA1	42	-21.1	2	Cadmium transporting P-type ATPase; may also have a role in copper and iron homeostasis; stabilized by Cd binding, which prevents ubiquitination; S288C and other lab strains contain a G970R mutation which eliminates Cd transport function [Source:SGD;Acc:S000000499]
B	YBR298C	MAL31	37	-18.7	2	Maltose permease, high-affinity maltose transporter (alpha-glucoside transporter); encoded in the MAL3 complex locus; member of the 12 transmembrane domain superfamily of sugar transporters; functional in genomic reference strain S288C [Source:SGD;Acc:S000000502]
B	YBR298C-A	YBR298C-A	8	-2.1	2	Putative protein of unknown function; identified by gene-trapping, microarray-based expression analysis, and genome-wide homology searching [Source:SGD;Acc:S000028606]
C	YCL002C	YCL002C	7	-2.2	2	Putative protein of unknown function; YCL002C is not an essential gene [Source:SGD;Acc:S000000508]
C	YCL005W-A	VMA9	48	-43.5	2	Vacuolar H+ ATPase subunit e of the V-ATPase V0 subcomplex; essential for vacuolar acidification; interacts with the V-ATPase assembly factor Vma21p in the ER; involved in V0 biogenesis [Source:SGD;Acc:S000028508]
C	YCL021W-A	YCL021W-A	7	-2.1	2	Putative protein of unknown function [Source:SGD;Acc:S000007549]
C	YCL042W	YCL042W	72	-13	2	Putative protein of unknown function; epitope-tagged protein localizes to the cytoplasm [Source:SGD;Acc:S000000547]
C	YCL046W	YCL046W	6	-2.2	2	Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data; partially overlaps the uncharacterized ORF YCL045C [Source:SGD;Acc:S000000551]
C	YCL048W	SPS22	23	-4.6	2	Protein of unknown function, redundant with Sps2p for the organization of the beta-glucan layer of the spore wall [Source:SGD;Acc:S000000553]
C	YCL056C	PEX34	16	-14.8	2	Peroxisomal integral membrane protein that regulates peroxisome populations; interacts with Pex11p, Pex25p, and Pex27p to control both constitutive peroxisome division and peroxisome morphology and abundance during peroxisome proliferation [Source:SGD;Acc:S000000561]
C	YCL068C	YCL068C	7	-12.7	2	Putative protein of unknown function [Source:SGD;Acc:S000000573]
C	YCL069W	VBA3	20	-23.7	2	Permease of basic amino acids in the vacuolar membrane [Source:SGD;Acc:S000000574]
C	YCL073C	GEX1	10	-3.6	2	Proton:glutathione antiporter localized to the vacuolar and plasma membranes; imports glutathione from the vacuole and exports it through the plasma membrane; has a role in resistance to oxidative stress and modulation of the PKA pathway [Source:SGD;Acc:S000000575]
C	YCL076W	YCL076W	3	-5.6	2	Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data [Source:SGD;Acc:S000000581]
C	YCR001W	YCR001W	5	-2.4	2	Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data; YCR001W is not an essential gene [Source:SGD;Acc:S000000594]
C	YCR006C	YCR006C	8	-2.4	2	Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data [Source:SGD;Acc:S000000599]
C	YCR013C	YCR013C	11	-7.6	2	Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data; transcription of both YCR013C and the overlapping essential gene PGK1 is reduced in a gcr1 null mutant [Source:SGD;Acc:S000000606]
C	YCR025C	YCR025C	3	-2.2	2	Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data; YCR025C is not an essential gene [Source:SGD;Acc:S000000620]
C	YCR045W-A	YCR045W-A	8	-4.6	2	Dubious ORF unlikely to encode a protein, based on available experimental and comparative sequence data; completely overlaps with YCR045C; identified by gene-trapping, microarray expression analysis, and genome-wide homology searching [Source:SGD;Acc:S000028607]
C	YCR049C	YCR049C	4	-2.2	2	Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data [Source:SGD;Acc:S000000645]
C	YCR075C	ERS1	10	-5.8	2	Protein with similarity to human cystinosin, which is a H(+)-driven transporter involved in L-cystine export from lysosomes and implicated in the disease cystinosis; contains seven transmembrane domains [Source:SGD;Acc:S000000671]
C	YCR085W	YCR085W	2	-2.1	2	Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data [Source:SGD;Acc:S000000681]
C	YCR089W	FIG2	8	-10.6	2	Cell wall adhesin, expressed specifically during mating; may be involved in maintenance of cell wall integrity during mating [Source:SGD;Acc:S000000685]
C	YCR095W-A	YCR095W-A	22	-4.7	2	Putative protein of unknown function [Source:SGD;Acc:S000029724]
C	YCR097W	HMRA1	9	-5.2	2	Silenced copy of a1 at HMR; homeobox corepressor that interacts with Alpha2p to repress haploid-specific gene transcription in diploid cells [Source:SGD;Acc:S000000694]
C	YCR099C	YCR099C	7	-4.6	2	Putative protein of unknown function [Source:SGD;Acc:S000000696]
C	YCR101C	YCR101C	11	-10.9	2	Putative protein of unknown function; localizes to the membrane fraction; YCR101C is not an essential gene [Source:SGD;Acc:S000000698]
C	YCR102W-A	YCR102W-A	1	-2.3	2	Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data [Source:SGD;Acc:S000007231]
C	YCR104W	PAU3	8	-2.3	2	Member of the seripauperin multigene family encoded mainly in subtelomeric regions, active during alcoholic fermentation, regulated by anaerobiosis, negatively regulated by oxygen, repressed by heme [Source:SGD;Acc:S000000701]
C	YCR106W	RDS1	37	-25.2	2	Zinc cluster transcription factor involved in conferring resistance to cycloheximide [Source:SGD;Acc:S000000703]
C	YCR107W	AAD3	14	-9.9	2	Putative aryl-alcohol dehydrogenase; similar to P. chrysosporium aryl-alcohol dehydrogenase; mutational analysis has not yet revealed a physiological role [Source:SGD;Acc:S000000704]
D	YDL007C-A	YDL007C-A	1	-2.2	2	Putative protein of unknown function [Source:SGD;Acc:S000113557]
D	YDL009C	YDL009C	15	-10.5	2	Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data; partially overlaps the uncharacterized ORF YDL010W; YDL009C is not an essential gene [Source:SGD;Acc:S000002167]
D	YDL016C	YDL016C	6	-2.5	2	Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data; partially overlaps the verified ORF CDC7/YDL153C, the catalytic subunit of a complex that regulates DNA replication [Source:SGD;Acc:S000002174]
D	YDL022C-A	YDL022C-A	1	-8.2	2	Dubious open reading frame unlikely to encode a protein; partially overlaps the verified gene DIA3; identified by fungal homology and RT-PCR [Source:SGD;Acc:S000028537]
D	YDL023C	YDL023C	1	-2.3	2	Dubious open reading frame, unlikely to encode a protein; not conserved in other Saccharomyces species; overlaps the verified gene GPD1; deletion confers sensitivity to GSAO; deletion in cyr1 mutant results in loss of stress resistance [Source:SGD;Acc:S000002181]
D	YDL024C	DIA3	23	-27	2	Protein of unknown function, involved in invasive and pseudohyphal growth [Source:SGD;Acc:S000002182]
D	YDL032W	YDL032W	3	-2.6	2	Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data; partially overlaps verified gene SLM3/YDL033C; YDL032W is not an essential gene [Source:SGD;Acc:S000002190]
D	YDL039C	PRM7	3	-11.8	2	Pheromone-regulated protein, predicted to have one transmembrane segment; promoter contains Gcn4p binding elements [Source:SGD;Acc:S000002197]
D	YDL041W	YDL041W	12	-7.6	2	Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data; overlaps the verified gene SIR2/YDL042C [Source:SGD;Acc:S000002199]
D	YDL049C	KNH1	9	-17.4	2	Protein with similarity to Kre9p, which is involved in cell wall beta 1,6-glucan synthesis; overproduction suppresses growth defects of a kre9 null mutant; required for propionic acid resistance [Source:SGD;Acc:S000002207]
D	YDL062W	YDL062W	13	-5.4	2	Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data; partially overlaps uncharacterized ORF YDL063C; YDL062W is not essential [Source:SGD;Acc:S000002220]
D	YDL068W	YDL068W	3	-4.2	2	Dubious ORF unlikely to encode a protein, based on available experimental and comparative sequence data [Source:SGD;Acc:S000002226]
D	YDL071C	YDL071C	4	-9.4	2	Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data; partially overlaps the verified ORF BDF2/YDL070W [Source:SGD;Acc:S000002229]
D	YDL094C	YDL094C	5	-10.4	2	Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data; partially overlaps verfied gene PMT5/YDL093W; YDL094C is not essential [Source:SGD;Acc:S000002252]
D	YDL096C	OPI6	5	-7.3	2	Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data; partially overlaps verified gene PMT1/YDL095W; YDL096C is not essential [Source:SGD;Acc:S000002254]
D	YDL109C	YDL109C	17	-2.3	2	Putative lipase; involved in lipid metabolism; YDL109C is not an essential gene [Source:SGD;Acc:S000002267]
D	YDL127W	PCL2	22	-12.4	2	Cyclin, interacts with cyclin-dependent kinase Pho85p; member of the Pcl1,2-like subfamily, involved in the regulation of polarized growth and morphogenesis and progression through the cell cycle; localizes to sites of polarized cell growth [Source:SGD;Acc:S000002285]
D	YDL138W	RGT2	19	-10.9	2	Plasma membrane high glucose sensor that regulates glucose transport; contains 12 predicted transmembrane segments and a long C-terminal tail required for induction of hexose transporters; highly similar to Snf3p [Source:SGD;Acc:S000002297]
D	YDL151C	BUD30	12	-3.6	2	Dubious open reading frame, unlikely to encode a protein; not conserved in closely related Saccharomyces species; 96% of ORF overlaps the verified gene RPC53; diploid mutant displays a weak budding pattern phenotype in a systematic assay [Source:SGD;Acc:S000002310]
D	YDL154W	MSH5	31	-8.9	2	Protein of the MutS family, forms a dimer with Msh4p that facilitates crossovers between homologs during meiosis; msh5-Y823H mutation confers tolerance to DNA alkylating agents; homologs present in C. elegans and humans [Source:SGD;Acc:S000002313]
D	YDL162C	YDL162C	5	-3.3	2	Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data; partially overlaps ENT1/YDL161W, a verified gene involved in endocytosis and actin cortical patch assembly [Source:SGD;Acc:S000002321]
D	YDL172C	YDL172C	3	-2.2	2	Dubious ORF unlikely to encode a protein, based on available experimental and comparative sequence data [Source:SGD;Acc:S000002331]
D	YDL186W	YDL186W	8	-2.3	2	Putative protein of unknown function; YDL186W is not an essential gene [Source:SGD;Acc:S000002345]
D	YDL232W	OST4	6	-10.4	2	Subunit of the oligosaccharyltransferase complex of the ER lumen, which catalyzes protein asparagine-linked glycosylation; type I membrane protein required for incorporation of Ost3p or Ost6p into the OST complex [Source:SGD;Acc:S000002391]
D	YDL239C	ADY3	24	-11.5	2	Protein required for spore wall formation, thought to mediate assembly of a Don1p-containing structure at the leading edge of the prospore membrane via interaction with spindle pole body components; potentially phosphorylated by Cdc28p [Source:SGD;Acc:S000002398]
D	YDL241W	YDL241W	11	-9.1	2	Putative protein of unknown function; YDL241W is not an essential gene [Source:SGD;Acc:S000002400]
D	YDL242W	YDL242W	7	-2.4	2	Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data [Source:SGD;Acc:S000002401]
D	YDL243C	AAD4	9	-3.2	2	Putative aryl-alcohol dehydrogenase; involved in oxidative stress response; similar to P. chrysosporium aryl-alcohol dehydrogenase; expression induced in cells treated with the mycotoxin patulin [Source:SGD;Acc:S000002402]
D	YDL245C	HXT15	234	-22.2	2	Protein of unknown function with similarity to hexose transporter family members, expression is induced by low levels of glucose and repressed by high levels of glucose [Source:SGD;Acc:S000002404]
D	YDL247W	MPH2	17	-8.2	2	Alpha-glucoside permease, transports maltose, maltotriose, alpha-methylglucoside, and turanose; identical to Mph3p; encoded in a subtelomeric position in a region likely to have undergone duplication [Source:SGD;Acc:S000002406]
D	YDR004W	RAD57	17	-7.6	2	Protein that stimulates strand exchange by stabilizing the binding of Rad51p to single-stranded DNA; involved in the recombinational repair of double-strand breaks in DNA during vegetative growth and meiosis; forms heterodimer with Rad55p [Source:SGD;Acc:S000002411]
D	YDR008C	YDR008C	3	-2.3	2	Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data [Source:SGD;Acc:S000002415]
D	YDR010C	YDR010C	5	-2.1	2	Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data [Source:SGD;Acc:S000002417]
D	YDR014W-A	HED1	7	-12.4	2	Meiosis-specific protein that down-regulates Rad51p-mediated mitotic recombination when the meiotic recombination machinery is impaired; early meiotic gene, transcribed specifically during meiotic prophase [Source:SGD;Acc:S000113613]
D	YDR015C	YDR015C	3	-2.3	2	Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data; overlaps the verified gene HED1/YDR014W-A [Source:SGD;Acc:S000002422]
D	YDR018C	YDR018C	12	-10.3	2	Probable membrane protein with three predicted transmembrane domains; homologous to Ybr042cp, similar to C. elegans F55A11.5 and maize 1-acyl-glycerol-3-phosphate acyltransferase [Source:SGD;Acc:S000002425]
D	YDR024W	FYV1	6	-2.4	2	Dubious open reading frame, unlikely to encode a protein; not conserved in closely related Saccharomyces species; mutation decreases survival upon exposure to K1 killer toxin [Source:SGD;Acc:S000002431]
D	YDR029W	YDR029W	6	-2.3	2	Dubious ORF unlikely to encode a protein, based on available experimental and comparative sequence data [Source:SGD;Acc:S000002436]
D	YDR066C	RTR2	37	-27.7	2	Protein of unknown function with high similarity to Rtr1p; exhibits genetic interactions with Rtr1p; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm; YDR066C is not an essential gene [Source:SGD;Acc:S000002473]
D	YDR076W	RAD55	25	-36	2	Protein that stimulates strand exchange by stabilizing the binding of Rad51p to single-stranded DNA; involved in the recombinational repair of double-strand breaks in DNA during vegetative growth and meiosis; forms heterodimer with Rad57p [Source:SGD;Acc:S000002483]
D	YDR078C	SHU2	39	-16.8	2	Component of the Shu complex, which promotes error-free DNA repair; Shu complex mediates inhibition of Srs2p function [Source:SGD;Acc:S000002485]
D	YDR082W	STN1	17	-20.2	2	Telomere end-binding and capping protein, plays a key role with Pol12p in linking telomerase action with completion of lagging strand synthesis, and in a regulatory step required for telomere capping [Source:SGD;Acc:S000002489]
D	YDR095C	YDR095C	7	-2.2	2	Dubious open reading frame unlikely to encode a functional protein, based on available experimental and comparative sequence data [Source:SGD;Acc:S000002502]
D	YDR102C	YDR102C	4	-2.2	2	Dubious open reading frame; homozygous diploid deletion strain exhibits high budding index [Source:SGD;Acc:S000002509]
D	YDR106W	ARP10	10	-19.7	2	Component of the dynactin complex, localized to the pointed end of the Arp1p filament; may regulate membrane association of the complex [Source:SGD;Acc:S000002513]
D	YDR112W	IRC2	4	-2.9	2	Dubious open reading frame, unlikely to encode a protein, based on available experimental and comparative sequence data; partially overlaps YDR111C; null mutant displays increased levels of spontaneous Rad52p foci [Source:SGD;Acc:S000002519]
D	YDR124W	YDR124W	12	-2.4	2	Putative protein of unknown function; non-essential gene; expression is strongly induced by alpha factor [Source:SGD;Acc:S000002531]
D	YDR126W	SWF1	25	-14.9	2	Palmitoyltransferase that acts on transmembrane proteins, including the SNAREs Snc1p, Syn8p, Tlg1p and likely all SNAREs; contains an Asp-His-His-Cys-cysteine rich (DHHC-CRD) domain; may have a role in vacuole fusion [Source:SGD;Acc:S000002533]
D	YDR136C	VPS61	20	-2.4	2	Dubious open reading frame, unlikely to encode a protein; not conserved in closely related Saccharomyces species; 4% of ORF overlaps the verified gene RGP1; deletion causes a vacuolar protein sorting defect [Source:SGD;Acc:S000002543]
D	YDR154C	YDR154C	1	-2.4	2	Dubious open reading frame, null mutant exhibits synthetic phenotype with alpha-synuclein [Source:SGD;Acc:S000002561]
D	YDR160W	SSY1	25	-14.7	2	Component of the SPS plasma membrane amino acid sensor system (Ssy1p-Ptr3p-Ssy5p), which senses external amino acid concentration and transmits intracellular signals that result in regulation of expression of amino acid permease genes [Source:SGD;Acc:S000002567]
D	YDR182W-A	YDR182W-A	5	-3.3	2	Putative protein of unknown function; identified by fungal homology and RT-PCR [Source:SGD;Acc:S000028539]
D	YDR185C	UPS3	27	-23.2	2	Mitochondrial protein of unknown function; similar to Ups1p and Ups2p which are involved in regulation of mitochondrial cardiolipin and phosphatidylethanolamine levels; null is viable but interacts synthetically with ups1 and ups2 mutations [Source:SGD;Acc:S000002593]
D	YDR193W	YDR193W	8	-4	2	Dubious open reading frame unlikely to encode a functional protein, based on available experimental and comparative sequence data [Source:SGD;Acc:S000002601]
D	YDR194W-A	YDR194W-A	8	-2.2	2	Putative protein of unknown function; identified by fungal homology and RT-PCR [Source:SGD;Acc:S000028541]
D	YDR209C	YDR209C	323	-12.2	2	Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data; partially overlaps uncharacterized gene YDR210W. [Source:SGD;Acc:S000002617]
D	YDR218C	SPR28	12	-6	2	Sporulation-specific homolog of the yeast CDC3/10/11/12 family of bud neck microfilament genes; meiotic septin expressed at high levels during meiotic divisions and ascospore formation [Source:SGD;Acc:S000002626]
D	YDR223W	CRF1	12	-7.9	2	Transcriptional corepressor involved in repression of ribosomal protein (RP) gene transcription via the TOR signaling pathway which promotes accumulation of Crf1p in the nucleus; role in repression of RP genes varies by strain [Source:SGD;Acc:S000002631]
D	YDR241W	BUD26	8	-4	2	Dubious open reading frame, unlikely to encode a protein; not conserved in closely related Saccharomyces species; 1% of ORF overlaps the verified gene SNU56; diploid mutant displays a weak budding pattern phenotype in a systematic assay [Source:SGD;Acc:S000002649]
D	YDR249C	YDR249C	18	-12.6	2	Putative protein of unknown function [Source:SGD;Acc:S000002657]
D	YDR263C	DIN7	21	-9.4	2	Mitochondrial nuclease functioning in DNA repair and replication, modulates the stability of the mitochondrial genome, induced by exposure to mutagens, also induced during meiosis at a time nearly coincident with commitment to recombination [Source:SGD;Acc:S000002671]
D	YDR281C	PHM6	5	-2.3	2	Protein of unknown function, expression is regulated by phosphate levels [Source:SGD;Acc:S000002689]
D	YDR290W	YDR290W	3	-2.2	2	Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data; partially overlaps the verified ORF RTT103 [Source:SGD;Acc:S000002698]
D	YDR317W	HIM1	22	-17.8	2	Protein of unknown function involved in DNA repair [Source:SGD;Acc:S000002725]
D	YDR319C	YFT2	5	-2.6	2	Putative protein of unknown function, identified as an ortholog of the highly conserved FIT family of proteins involved in triglyceride droplet biosynthesis; interacts with Sst2p and Hsp82p in high-throughput two-hybrid screens [Source:SGD;Acc:S000002727]
D	YDR327W	YDR327W	9	-2.6	2	Dubious open reading frame unlikely to encode a protein, based on experimental and comparative sequence data; partially overlaps the verified gene SKP1 [Source:SGD;Acc:S000002735]
D	YDR336W	YDR336W	32	-81	2	Putative protein of unknown function; sumoylated under stress conditions in a genome wide study; YDR336W is not an essential gene [Source:SGD;Acc:S000002744]
D	YDR340W	YDR340W	6	-2.1	2	Putative protein of unknown function [Source:SGD;Acc:S000002748]
D	YDR360W	OPI7	5	-2.8	2	Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data; partially overlaps verified gene VID21/YDR359C. [Source:SGD;Acc:S000002768]
D	YDR366C	YDR366C	2	-2	2	Putative protein of unknown function [Source:SGD;Acc:S000002774]
D	YDR371C-A	YDR371C-A	4	-2.4	2	Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data; completeley overlaps the uncharacterized gene CTS2/YDR371W; identified by expression profiling and mass spectrometry [Source:SGD;Acc:S000028822]
D	YDR374C	PHO92	13	-9.5	2	Putative protein of unknown function [Source:SGD;Acc:S000002782]
D	YDR387C	YDR387C	26	-20.2	2	Putative transporter, member of the sugar porter family; YDR387C is not an essential gene [Source:SGD;Acc:S000002795]
D	YDR402C	DIT2	15	-3.4	2	N-formyltyrosine oxidase, sporulation-specific microsomal enzyme involved in the production of N,N-bisformyl dityrosine required for spore wall maturation, homologous to cytochrome P-450s [Source:SGD;Acc:S000002810]
D	YDR403W	DIT1	18	-8.1	2	Sporulation-specific enzyme required for spore wall maturation, involved in the production of a soluble LL-dityrosine-containing precursor of the spore wall; transcripts accumulate at the time of prospore enclosure [Source:SGD;Acc:S000002811]
D	YDR420W	HKR1	27	-36.3	2	Mucin family member that functions as an osmosensor in the Sho1p-mediated HOG pathway with Msb2p; proposed to be a negative regulator of filamentous growth; mutant displays defects in beta-1,3 glucan synthesis and bud site selection [Source:SGD;Acc:S000002828]
D	YDR437W	GPI19	6	-7.3	2	Subunit of GPI-GlcNAc transferase involved in synthesis of N-acetylglucosaminyl phosphatidylinositol (GlcNAc-PI), which is the first intermediate in glycosylphosphatidylinositol (GPI) anchor synthesis, shares similarity with mammalian PIG-P [Source:SGD;Acc:S000002845]
D	YDR438W	THI74	3	-3	2	Mitochondrial transporter repressible by thiamine [Source:SGD;Acc:S000002846]
D	YDR445C	YDR445C	5	-4.7	2	Dubious open reading frame unlikely to encode a functional protein, based on available experimental and comparative sequence data [Source:SGD;Acc:S000002853]
D	YDR451C	YHP1	39	-24.1	2	One of two homeobox transcriptional repressors (see also Yox1p), that bind to Mcm1p and to early cell cycle box (ECB) elements of cell cycle regulated genes, thereby restricting ECB-mediated transcription to the M/G1 interval [Source:SGD;Acc:S000002859]
D	YDR455C	YDR455C	8	-2.7	2	Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data; partially overlaps the verified gene YDR456W [Source:SGD;Acc:S000002863]
D	YDR459C	PFA5	13	-4.1	2	Palmitoyltransferase with autoacylation activity; likely functions in pathway(s) outside Ras; member of a family of putative palmitoyltransferases containing an Asp-His-His-Cys-cysteine rich (DHHC-CRD) domain [Source:SGD;Acc:S000002867]
D	YDR461W	MFA1	10	-9.4	2	Mating pheromone a-factor, made by a cells; interacts with alpha cells to induce cell cycle arrest and other responses leading to mating; biogenesis involves C-terminal modification, N-terminal proteolysis, and export; also encoded by MFA2 [Source:SGD;Acc:S000002869]
D	YDR464C-A	YDR464C-A	32	-4	2	Dubious open reading frame unlikely to encode a functional protein; identified by gene-trapping, microarray-based expression analysis, and genome-wide homology searching [Source:SGD;Acc:S000028614]
D	YDR525W	API2	3	-2.9	2	Dubious open reading frame, unlikely to encode a protein; not conserved in closely related Saccharomyces species; 26% of ORF overlaps the dubious ORF YDR524C-A; insertion mutation in a cdc34-2 mutant background causes altered bud morphology [Source:SGD;Acc:S000002933]
D	YDR534C	FIT1	6	-2.2	2	Mannoprotein that is incorporated into the cell wall via a glycosylphosphatidylinositol (GPI) anchor, involved in the retention of siderophore-iron in the cell wall [Source:SGD;Acc:S000002942]
D	YDR535C	YDR535C	5	-2.7	2	Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data; YDR535C is not an essential gene. [Source:SGD;Acc:S000002943]
D	YDR537C	YDR537C	5	-3	2	Dubious open reading frame unlikely to encode a protein, almost completely overlaps verified ORF PAD1/YDR538W [Source:SGD;Acc:S000002945]
E	YEL004W	YEA4	11	-12.8	2	Uridine diphosphate-N-acetylglucosamine (UDP-GlcNAc) transporter required for cell wall chitin synthesis; localized to the ER [Source:SGD;Acc:S000000730]
E	YEL009C-A	YEL009C-A	15	-14.1	2	Dubious open reading frame unlikely to encode a functional protein, based on available experimental and comparative sequence data [Source:SGD;Acc:S000028741]
E	YEL016C	NPP2	20	-11.8	2	Nucleotide pyrophosphatase/phosphodiesterase family member; mediates extracellular nucleotide phosphate hydrolysis along with Npp1p and Pho5p; activity and expression enhanced during conditions of phosphate starvation [Source:SGD;Acc:S000000742]
E	YEL017C-A	PMP2	2	-2.5	2	Proteolipid associated with plasma membrane H(+)-ATPase (Pma1p); regulates plasma membrane H(+)-ATPase activity; nearly identical to PMP1 [Source:SGD;Acc:S000002103]
E	YEL018C-A	YEL018C-A	10	-2.3	2	Dubious open reading frame unlikely to encode a functional protein, based on available experimental and comparative sequence data [Source:SGD;Acc:S000028742]
E	YEL023C	YEL023C	12	-2.4	2	Putative protein of unknown function; expression is increased greatly during sporulation; YEL023C is not an essential gene [Source:SGD;Acc:S000000749]
E	YEL025C	YEL025C	33	-61.8	2	Putative protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to both the cytoplasm and the nucleus [Source:SGD;Acc:S000000751]
E	YEL028W	YEL028W	6	-9.1	2	Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data [Source:SGD;Acc:S000000754]
E	YEL067C	YEL067C	9	-5.8	2	Putative protein of unknown function; the authentic, non-tagged protein is detected in highly purified mitochondria in high-throughput studies [Source:SGD;Acc:S000000793]
E	YEL068C	YEL068C	9	-12.8	2	Dubious open reading frame unlikely to encode a functional protein, based on available experimental and comparative sequence data [Source:SGD;Acc:S000000794]
E	YEL069C	HXT13	230	-25.7	2	Hexose transporter, induced in the presence of non-fermentable carbon sources, induced by low levels of glucose, repressed by high levels of glucose [Source:SGD;Acc:S000000795]
E	YEL072W	RMD6	6	-28.1	2	Protein required for sporulation [Source:SGD;Acc:S000000798]
E	YEL075W-A	YEL075W-A	10	-2.7	2	Dubious open reading frame unlikely to encode a functional protein, based on available experimental and comparative sequence data [Source:SGD;Acc:S000002956]
E	YER035W	EDC2	9	-12.7	2	RNA-binding protein, activates mRNA decapping directly by binding to the mRNA substrate and enhancing the activity of the decapping proteins Dcp1p and Dcp2p; has a role in translation during heat stress [Source:SGD;Acc:S000000837]
E	YER039C-A	YER039C-A	1	-2.4	2	Putative protein of unknown function; YER039C-A is not an essential gene [Source:SGD;Acc:S000007226]
E	YER044C-A	MEI4	4	-2.3	2	Meiosis-specific protein involved in double-strand break formation during meiotic recombination; required for chromosome synapsis and production of viable spores [Source:SGD;Acc:S000001954]
E	YER046W-A	YER046W-A	1	-2.6	2	Dubious open reading frame unlikely to encode a functional protein, based on available experimental and comparative sequence data [Source:SGD;Acc:S000028747]
E	YER053C-A	YER053C-A	2	-2.8	2	Putative protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to the endoplasmic reticulum [Source:SGD;Acc:S000007523]
E	YER060W-A	FCY22	8	-13.3	2	Putative purine-cytosine permease, very similar to Fcy2p but cannot substitute for its function [Source:SGD;Acc:S000002958]
E	YER066C-A	YER066C-A	4	-4.7	2	Dubious open reading frame unlikely to encode a protein, partially overlaps uncharacterized ORF YER067W [Source:SGD;Acc:S000002959]
E	YER076C	YER076C	5	-3.7	2	Putative protein of unknown function; the authentic, non-tagged protein is detected in highly purified mitochondria in high-throughput studies; analysis of HA-tagged protein suggests a membrane localization [Source:SGD;Acc:S000000878]
E	YER079C-A	YER079C-A	1	-6.6	2	Dubious open reading frame unlikely to encode a protein, partially overlaps uncharacterized ORF YER080W [Source:SGD;Acc:S000028751]
E	YER084W	YER084W	10	-11	2	Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data [Source:SGD;Acc:S000000886]
E	YER084W-A	YER084W-A	2	-5.4	2	Dubious open reading frame unlikely to encode a functional protein, based on available experimental and comparative sequence data [Source:SGD;Acc:S000028752]
E	YER088C-A	YER088C-A	74	-14.7	2	Dubious open reading frame unlikely to encode a functional protein, based on available experimental and comparative sequence data [Source:SGD;Acc:S000028754]
E	YER091C-A	YER091C-A	5	-3.3	2	Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data [Source:SGD;Acc:S000007238]
E	YER096W	SHC1	26	-11.6	2	Sporulation-specific activator of Chs3p (chitin synthase III), required for the synthesis of the chitosan layer of ascospores; has similarity to Skt5p, which activates Chs3p during vegetative growth; transcriptionally induced at alkaline pH [Source:SGD;Acc:S000000898]
E	YER097W	YER097W	6	-2.4	2	Dubious open reading frame unlikely to encode a functional protein, based on available experimental and comparative sequence data [Source:SGD;Acc:S000000899]
E	YER106W	MAM1	8	-10.6	2	Monopolin, kinetochore associated protein involved in chromosome attachment to meiotic spindle [Source:SGD;Acc:S000000908]
E	YER115C	SPR6	8	-2.4	2	Protein of unknown function, expressed during sporulation; not required for sporulation, but gene exhibits genetic interactions with other genes required for sporulation [Source:SGD;Acc:S000000917]
E	YER121W	YER121W	2	-5.4	2	Putative protein of unknown function; may be involved in phosphatase regulation and/or generation of precursor metabolites and energy [Source:SGD;Acc:S000000923]
E	YER137W-A	YER137W-A	2	-2.1	2	Dubious open reading frame unlikely to encode a functional protein, based on available experimental and comparative sequence data [Source:SGD;Acc:S000028757]
E	YER145C-A	YER145C-A	5	-12	2	Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data; overlaps the verified ORF LSM5/YER146W [Source:SGD;Acc:S000028758]
E	YER150W	SPI1	12	-13.7	2	GPI-anchored cell wall protein involved in weak acid resistance; basal expression requires Msn2p/Msn4p; expression is induced under conditions of stress and during the diauxic shift; similar to Sed1p [Source:SGD;Acc:S000000952]
E	YER152W-A	YER152W-A	8	-2.6	2	Dubious ORF unlikely to encode a functional protein, based on available experimental and comparative sequence data [Source:SGD;Acc:S000028761]
E	YER158W-A	YER158W-A	2	-2.9	2	Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data; identified by gene-trapping, microarray-based expression analysis, and genome-wide homology searching [Source:SGD;Acc:S000028624]
E	YER180C	ISC10	10	-2.1	2	Protein required for sporulation, transcript is induced 7.5 hours after induction of meiosis, expected to play significant role in the formation of reproductive cells [Source:SGD;Acc:S000000982]
E	YER181C	YER181C	36	-13.7	2	Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative data; extensively overlaps a Ty1 LTR; protein product is detected in highly purified mitochondria in high-throughput studies [Source:SGD;Acc:S000000983]
E	YER184C	TOG1	32	-11.8	2	Putative zinc cluster protein; deletion confers sensitivity to Calcufluor white, and prevents growth on glycerol or lactate as sole carbon source [Source:SGD;Acc:S000000986]
E	YER186C	YER186C	16	-36.2	2	Putative protein of unknown function [Source:SGD;Acc:S000000988]
E	YER187W	YER187W	7	-11.5	2	Putative protein of unknown function; induced in respiratory-deficient cells [Source:SGD;Acc:S000000989]
E	YER190C-A	YER190C-A	14	-25.7	2	Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data; completely overlaps the verified ORF YRF1-2/YER190W; identified by gene-trapping, expression analysis, and homology [Source:SGD;Acc:S000028626]
F	YFL012W	YFL012W	1	-2.6	2	Putative protein of unknown function; transcribed during sporulation; null mutant exhibits increased resistance to rapamycin [Source:SGD;Acc:S000001882]
F	YFL012W-A	YFL012W-A	5	-18.9	2	Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data; overlaps the verified gene IES1/YFL013C [Source:SGD;Acc:S000002964]
F	YFL013W-A	YFL013W-A	5	-2.7	2	Dubious ORF unlikely to encode a protein, based on available experimental and comparative sequence data; partially overlaps IES1/YFL013C; identified by gene-trapping, microarray expression analysis, and genome-wide homology searching [Source:SGD;Acc:S000028628]
F	YFL015W-A	YFL015W-A	9	-3.4	2	Dubious open reading frame unlikely to encode a functional protein, based on available experimental and comparative sequence data [Source:SGD;Acc:S000028765]
F	YFL019C	YFL019C	8	-7	2	Dubious open reading frame unlikely to encode a protein; YFL019C is not an essential gene [Source:SGD;Acc:S000001875]
F	YFL020C	PAU5	7	-2.2	2	Member of the seripauperin multigene family encoded mainly in subtelomeric regions; induced during alcoholic fermentation; induced by low temperature and also by anaerobic conditions; negatively regulated by oxygen and repressed by heme [Source:SGD;Acc:S000001874]
F	YFL021C-A	YFL021C-A	23	-11.5	2	Dubious open reading frame unlikely to encode a functional protein, based on available experimental and comparative sequence data [Source:SGD;Acc:S000028766]
F	YFL040W	YFL040W	5	-9.1	2	Putative transporter, member of the sugar porter family; YFL040W is not an essential gene [Source:SGD;Acc:S000001854]
F	YFL052W	YFL052W	19	-14.6	2	Putative zinc cluster protein that contains a DNA binding domain; null mutant sensitive to calcofluor white, low osmolarity and heat, suggesting a role for YFL052Wp in cell wall integrity [Source:SGD;Acc:S000001842]
F	YFL055W	AGP3	29	-8.8	2	Low-affinity amino acid permease, may act to supply the cell with amino acids as nitrogen source in nitrogen-poor conditions; transcription is induced under conditions of sulfur limitation; plays a role in regulating Ty1 transposition [Source:SGD;Acc:S000001839]
F	YFL057C	AAD16	8	-17.5	2	Putative aryl-alcohol dehydrogenase; similar to P. chrysosporium aryl-alcohol dehydrogenase; mutational analysis has not yet revealed a physiological role [Source:SGD;Acc:S000001837]
F	YFL067W	YFL067W	20	-15.6	2	Protein of unknown function, down-regulated at low calcium levels [Source:SGD;Acc:S000001827]
F	YFR010W-A	YFR010W-A	1	-4.4	2	Dubious ORF unlikely to encode a protein, based on available experimental and comparative sequence data; completely overlaps the uncharacterized gene YFR011C; identified by expression profiling and mass spectrometry [Source:SGD;Acc:S000028824]
F	YFR020W	YFR020W	12	-20.9	2	Dubious open reading frame unlikely to encode a functional protein, based on available experimental and comparative sequence data [Source:SGD;Acc:S000001916]
F	YFR023W	PES4	34	-25.4	2	Poly(A) binding protein, suppressor of DNA polymerase epsilon mutation, similar to Mip6p [Source:SGD;Acc:S000001919]
F	YFR026C	ULI1	4	-2.1	2	Putative protein of unknown function involved in and induced by the endoplasmic reticulum unfolded protein response [Source:SGD;Acc:S000001922]
F	YFR027W	ECO1	35	-12	2	Acetyltransferase required for establishment of sister chromatid cohesion; modifies Smc3p at replication forks and Mcd1p in response to ds DNA breaks; has a C2H2-type zinc finger; mutations in human homolog ESCO2 cause Roberts syndrome [Source:SGD;Acc:S000001923]
F	YFR052C-A	YFR052C-A	7	-2.7	2	Dubious open reading frame unlikely to encode a functional protein, based on available experimental and comparative sequence data [Source:SGD;Acc:S000028768]
F	YFR054C	YFR054C	8	-7.3	2	Dubious open reading frame unlikely to encode a functional protein, based on available experimental and comparative sequence data [Source:SGD;Acc:S000001950]
F	YFR055W	IRC7	26	-10.4	2	Beta-lyase involved in the production of thiols; null mutant displays increased levels of spontaneous Rad52p foci; expression induced by nitrogen limitation in a GLN3, GAT1-dependent manner and by copper levels in a Mac1-dependent manner [Source:SGD;Acc:S000001952]
G	YGL007W	BRP1	13	-3.3	2	Dubious ORF located in the upstream region of PMA1, deletion leads to polyamine resistance due to downregulation of PMA1 [Source:SGD;Acc:S000002975]
G	YGL015C	YGL015C	2	-2.5	2	Putative protein of unknown function; null mutants accumulate cargo in the Golgi [Source:SGD;Acc:S000002983]
G	YGL024W	YGL024W	6	-12	2	Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data; partially/completely overlaps the verified ORF PGD1/YGL025C [Source:SGD;Acc:S000002992]
G	YGL029W	CGR1	52	-45.8	2	Protein involved in nucleolar integrity and processing of the pre-rRNA for the 60S ribosome subunit; transcript is induced in response to cytotoxic stress but not genotoxic stress [Source:SGD;Acc:S000002997]
G	YGL033W	HOP2	3	-11.8	2	Meiosis-specific protein that localizes to chromosomes, preventing synapsis between nonhomologous chromosomes and ensuring synapsis between homologs; complexes with Mnd1p to promote homolog pairing and meiotic double-strand break repair [Source:SGD;Acc:S000003001]
G	YGL034C	YGL034C	6	-2.4	2	Dubious open reading frame unlikely to encode a functional protein, based on available experimental and comparative sequence data [Source:SGD;Acc:S000003002]
G	YGL052W	YGL052W	4	-10.8	2	Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data; partially overlaps the verified ORF MST27 [Source:SGD;Acc:S000003020]
G	YGL069C	YGL069C	7	-47.2	2	Dubious open reading frame, unlikely to encode a protein; not conserved in closely related Saccharomyces species; 92% of ORF overlaps the uncharacterized ORF YGL068W; deletion in cyr1 mutant results in loss of stress resistance [Source:SGD;Acc:S000003037]
G	YGL074C	YGL074C	2	-2.5	2	Dubious open reading frame unlikely to encode a functional protein; overlaps 5' end of essential HSF1 gene encoding heat shock transcription factor [Source:SGD;Acc:S000003042]
G	YGL081W	YGL081W	12	-24.3	2	Putative protein of unknown function; non-essential gene; interacts genetically with CHS5, a gene involved in chitin biosynthesis [Source:SGD;Acc:S000003049]
G	YGL096W	TOS8	13	-30.8	2	Homeodomain-containing protein and putative transcription factor found associated with chromatin; target of SBF transcription factor; induced during meiosis and under cell-damaging conditions; similar to Cup9p transcription factor [Source:SGD;Acc:S000003064]
G	YGL118C	YGL118C	4	-2.4	2	Dubious open reading frame unlikely to encode a functional protein, based on available experimental and comparative sequence data [Source:SGD;Acc:S000003086]
G	YGL138C	YGL138C	3	-10.9	2	Putative protein of unknown function; has no significant sequence similarity to any known protein [Source:SGD;Acc:S000003106]
G	YGL152C	YGL152C	10	-19.6	2	Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data; partially overlaps the verified ORF PEX14/YGL153W [Source:SGD;Acc:S000003120]
G	YGL165C	YGL165C	3	-2.6	2	Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data; partially overlaps the verified ORF CUP2/YGL166W [Source:SGD;Acc:S000003133]
G	YGL170C	SPO74	13	-3.1	2	Component of the meiotic outer plaque of the spindle pole body, involved in modifying the meiotic outer plaque that is required prior to prospore membrane formation [Source:SGD;Acc:S000003138]
G	YGL183C	MND1	7	-11.2	2	Protein required for recombination and meiotic nuclear division; forms a complex with Hop2p, which is involved in chromosome pairing and repair of meiotic double-strand breaks [Source:SGD;Acc:S000003151]
G	YGL192W	IME4	10	-28	2	Probable mRNA N6-adenosine methyltransferase required for entry into meiosis; transcribed in diploid cells; haploids repress IME4 transcription via production of antisense IME4 transcripts; antisense transcription is repressed in diploids [Source:SGD;Acc:S000003160]
G	YGL193C	YGL193C	2	-2.6	2	Haploid-specific gene repressed by a1-alpha2, turned off in sir3 null strains, absence enhances the sensitivity of rad52-327 cells to campothecin almost 100-fold [Source:SGD;Acc:S000003161]
G	YGL214W	YGL214W	2	-2.1	2	Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data; deletion mutation phenotype is likely due to the overlapping verified ORF SKI8/YGL213C [Source:SGD;Acc:S000003182]
G	YGL217C	YGL217C	8	-5	2	Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data; partially overlaps the verified ORF KIP3/YGL216W [Source:SGD;Acc:S000003185]
G	YGL218W	YGL218W	7	-2.5	2	Dubious open reading frame, unlikely to encode a protein; not conserved in closely related Saccharomyces species; 93% of ORF overlaps the verified gene MDM34; deletion in cyr1 mutant results in loss of stress resistance [Source:SGD;Acc:S000003186]
G	YGL230C	YGL230C	11	-2.6	2	Putative protein of unknown function; non-essential gene [Source:SGD;Acc:S000003199]
G	YGL235W	YGL235W	4	-2.1	2	Putative protein of unknown function; potential Cdc28p substrate; null mutant displays increased resistance to antifungal agents gliotoxin, cycloheximide and H2O2 [Source:SGD;Acc:S000003204]
G	YGL239C	YGL239C	3	-2.4	2	Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data; partially overlaps verified gene CSE1 [Source:SGD;Acc:S000003208]
G	YGL249W	ZIP2	65	-2.3	2	Meiosis-specific protein involved in normal synaptonemal complex formation and pairing between homologous chromosomes during meiosis [Source:SGD;Acc:S000003218]
G	YGL251C	HFM1	36	-26	2	Meiosis specific DNA helicase involved in the conversion of double-stranded breaks to later recombination intermediates and in crossover control; catalyzes the unwinding of Holliday junctions; has ssDNA and dsDNA stimulated ATPase activity [Source:SGD;Acc:S000003220]
G	YGL258W-A	YGL258W-A	7	-7.7	2	Putative protein of unknown function [Source:SGD;Acc:S000007607]
G	YGL259W	YPS5	2	-2.4	2	Protein with similarity to GPI-anchored aspartic proteases such as Yap1p and Yap3p [Source:SGD;Acc:S000003228]
G	YGL260W	YGL260W	9	-3	2	Putative protein of unknown function; transcription is significantly increased in a NAP1 deletion background; deletion mutant has increased accumulation of nickel and selenium [Source:SGD;Acc:S000003229]
G	YGL263W	COS12	17	-14.1	2	Protein of unknown function, member of the DUP380 subfamily of conserved, often subtelomerically-encoded proteins [Source:SGD;Acc:S000003232]
G	YGR011W	YGR011W	1	-2.4	2	Dubious open reading frame unlikely to encode a functional protein, based on available experimental and comparative sequence data [Source:SGD;Acc:S000003243]
G	YGR025W	YGR025W	4	-2.1	2	Dubious open reading frame unlikely to encode a functional protein, based on available experimental and comparative sequence data [Source:SGD;Acc:S000003257]
G	YGR035C	YGR035C	10	-10.1	2	Putative protein of unknown function, potential Cdc28p substrate; transcription is activated by paralogous transcription factors Yrm1p and Yrr1p along with genes involved in multidrug resistance [Source:SGD;Acc:S000003267]
G	YGR035W-A	YGR035W-A	3	-2.7	2	Putative protein of unknown function [Source:SGD;Acc:S000028827]
G	YGR045C	YGR045C	4	-2.2	2	Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data [Source:SGD;Acc:S000003277]
G	YGR050C	YGR050C	7	-3.4	2	Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data [Source:SGD;Acc:S000003282]
G	YGR059W	SPR3	29	-21.9	2	Sporulation-specific homolog of the yeast CDC3/10/11/12 family of bud neck microfilament genes; septin protein involved in sporulation; regulated by ABFI [Source:SGD;Acc:S000003291]
G	YGR062C	COX18	12	-38.2	2	Mitochondrial integral inner membrane protein required for membrane insertion of C-terminus of Cox2p; interacts genetically and physically with Mss2p and Pnt1p; similar to S. cerevisiae Oxa1, N. crassa Oxa2p, and E. coli YidC [Source:SGD;Acc:S000003294]
G	YGR066C	YGR066C	5	-2.2	2	Putative protein of unknown function [Source:SGD;Acc:S000003298]
G	YGR073C	YGR073C	2	-11.3	2	Dubious open reading frame unlikely to encode a functional protein, extensively overlaps essential SMD1 gene encoding a U6 snRNP protein [Source:SGD;Acc:S000003305]
G	YGR079W	YGR079W	17	-4.9	2	Putative protein of unknown function; YGR079W is not an essential gene [Source:SGD;Acc:S000003311]
G	YGR108W	CLB1	46	-143.8	2	B-type cyclin involved in cell cycle progression; activates Cdc28p to promote the transition from G2 to M phase; accumulates during G2 and M, then targeted via a destruction box motif for ubiquitin-mediated degradation by the proteasome [Source:SGD;Acc:S000003340]
G	YGR115C	YGR115C	3	-2.1	2	Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data; partially overlaps the verified and essential ORF SPT6/YGR115C [Source:SGD;Acc:S000003347]
G	YGR131W	FHN1	10	-11.3	2	Protein of unknown function; induced by ketoconazole; promoter region contains sterol regulatory element motif, which has been identified as a Upc2p-binding site; overexpression complements function of Nce102p in NCE102 deletion strain [Source:SGD;Acc:S000003363]
G	YGR137W	YGR137W	1	-2.2	2	Dubious open reading frame unlikely to encode a functional protein, based on available experimental and comparative sequence data [Source:SGD;Acc:S000003369]
G	YGR139W	YGR139W	1	-2.9	2	Dubious ORF unlikely to encode a functional protein, based on available experimental and comparative sequence data [Source:SGD;Acc:S000003371]
G	YGR146C	ECL1	37	-12.1	2	Protein of unknown function, affects chronological lifespan; induced by iron homeostasis transcription factor Aft2p; multicopy suppressor of temperature sensitive hsf1 mutant; induced by treatment with 8-methoxypsoralen and UVA irradiation [Source:SGD;Acc:S000003378]
G	YGR153W	YGR153W	13	-2.1	2	Putative protein of unknown function [Source:SGD;Acc:S000003385]
G	YGR161W-C	YGR161W-C	1	-6.7	2	Putative protein of unknown function; identified by sequence comparison with hemiascomycetous yeast species [Source:SGD;Acc:S000029726]
G	YGR164W	YGR164W	1	-2.5	2	Dubious open reading frame unlikely to encode a functional protein, based on available experimental and comparative sequence data [Source:SGD;Acc:S000003396]
G	YGR182C	YGR182C	31	-2.7	2	Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data; partially overlaps the verified ORF TIM13/YGR181W [Source:SGD;Acc:S000003414]
G	YGR190C	YGR190C	2	-2.1	2	Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data; overlaps the verified gene HIP1/YGR191W [Source:SGD;Acc:S000003422]
G	YGR213C	RTA1	14	-4.2	2	Protein involved in 7-aminocholesterol resistance; has seven potential membrane-spanning regions; expression is induced under both low-heme and low-oxygen conditions; member of the fungal lipid-translocating exporter (LTE) family of protein [Source:SGD;Acc:S000003445]
G	YGR219W	YGR219W	3	-2.6	2	Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data; partially overlaps the verified ORF MRPL9/YGR220C [Source:SGD;Acc:S000003451]
G	YGR224W	AZR1	5	-2.2	2	Plasma membrane transporter of the major facilitator superfamily, involved in resistance to azole drugs such as ketoconazole and fluconazole [Source:SGD;Acc:S000003456]
G	YGR225W	AMA1	36	-17.6	2	Activator of meiotic anaphase promoting complex (APC/C); Cdc20p family member; required for initiation of spore wall assembly; required for Clb1p degradation during meiosis [Source:SGD;Acc:S000003457]
G	YGR226C	YGR226C	7	-2.2	2	Dubious open reading frame, unlikely to encode a protein; not conserved in closely related Saccharomyces species; overlaps significantly with a verified ORF, AMA1/YGR225W [Source:SGD;Acc:S000003458]
G	YGR230W	BNS1	9	-4.9	2	Protein with some similarity to Spo12p; overexpression bypasses need for Spo12p, but not required for meiosis [Source:SGD;Acc:S000003462]
G	YGR239C	PEX21	20	-17.8	2	Peroxin required for targeting of peroxisomal matrix proteins containing PTS2; interacts with Pex7p; partially redundant with Pex18p [Source:SGD;Acc:S000003471]
G	YGR249W	MGA1	38	-12.2	2	Protein similar to heat shock transcription factor; multicopy suppressor of pseudohyphal growth defects of ammonium permease mutants [Source:SGD;Acc:S000003481]
G	YGR259C	YGR259C	1	-2.1	2	Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data; overlaps almost completely with the verified ORF TNA1/YGR260W [Source:SGD;Acc:S000003491]
G	YGR265W	YGR265W	5	-9.5	2	Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data; partially overlaps the verified ORF MES1/YGR264C, which encodes methionyl-tRNA synthetase [Source:SGD;Acc:S000003497]
G	YGR273C	YGR273C	2	-9	2	Putative protein of unknown function; expression downregulated by treatment with 8-methoxypsoralen plus UVA irradiation; YGR273C is not an essential gene [Source:SGD;Acc:S000003505]
G	YGR289C	MAL11	8	-6.2	2	Inducible high-affinity maltose transporter (alpha-glucoside transporter); encoded in the MAL1 complex locus; broad substrate specificity that includes maltotriose; required for isomaltose utilization [Source:SGD;Acc:S000003521]
G	YGR291C	YGR291C	6	-2.1	2	Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data [Source:SGD;Acc:S000003523]
G	YGR296C-A	YGR296C-A	14	-25.7	2	Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data; completely overlaps TEL07R [Source:SGD;Acc:S000028642]
H	YHL009W-A	YHL009W-A	13	-11.4	2	Retrotransposon TYA Gag gene co-transcribed with TYB Pol; translated as TYA or TYA-TYB polyprotein; Gag is a nucleocapsid protein that is the structural constituent of virus-like particles (VLPs); similar to retroviral Gag [Source:SGD;Acc:S000007371]
H	YHL009W-B	YHL009W-B	40	-27.7	2	Retrotransposon TYA Gag and TYB Pol genes; transcribed/translated as one unit; polyprotein is processed to make a nucleocapsid-like protein (Gag), reverse transcriptase (RT), protease (PR), and integrase (IN); similar to retroviral genes [Source:SGD;Acc:S000007372]
H	YHL012W	YHL012W	22	-18.1	2	Putative protein of unknown function, has some homology to Ugp1p, which encodes UDP-glucose pyrophosphorylase [Source:SGD;Acc:S000001004]
H	YHL015W-A	YHL015W-A	4	-2.4	2	Putative protein of unknown function [Source:SGD;Acc:S000028828]
H	YHL019W-A	YHL019W-A	3	-2.1	2	Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data; overlaps the verified gene APM2/YHL019C [Source:SGD;Acc:S000028772]
H	YHL026C	YHL026C	8	-11.2	2	Putative protein of unknown function; transcriptionally regulated by Upc2p via an upstream sterol response element; YHL026C is not an essential gene; in 2005 the start site was moved 141 nt upstream (see Locus History) [Source:SGD;Acc:S000001018]
H	YHL030W-A	YHL030W-A	1	-2.2	2	Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data; overlaps the verified gene GOS1/YHL031C [Source:SGD;Acc:S000028773]
H	YHL034W-A	YHL034W-A	53	-2.3	2	Dubious open reading frame unlikely to encode a functional protein, based on available experimental and comparative sequence data [Source:SGD;Acc:S000028774]
H	YHL036W	MUP3	16	-10.8	2	Low affinity methionine permease, similar to Mup1p [Source:SGD;Acc:S000001028]
H	YHL042W	YHL042W	14	-3.7	2	Putative protein of unknown function; member of the DUP380 subfamily of conserved, often subtelomerically-encoded proteins [Source:SGD;Acc:S000001034]
H	YHL043W	ECM34	4	-2.8	2	Putative protein of unknown function; member of the DUP380 subfamily of conserved, often subtelomerically-encoded proteins [Source:SGD;Acc:S000001035]
H	YHL044W	YHL044W	5	-3.3	2	Putative integral membrane protein, member of DUP240 gene family; green fluorescent protein (GFP)-fusion protein localizes to the plasma membrane in a punctate pattern [Source:SGD;Acc:S000001036]
H	YHL046W-A	YHL046W-A	7	-2.5	2	Dubious open reading frame unlikely to encode a functional protein, based on available experimental and comparative sequence data [Source:SGD;Acc:S000028775]
H	YHR015W	MIP6	28	-14.5	2	Putative RNA-binding protein, interacts with Mex67p, which is a component of the nuclear pore involved in nuclear mRNA export [Source:SGD;Acc:S000001057]
H	YHR022C	YHR022C	12	-34.8	2	Putative protein of unknown function; YHR022C is not an essential gene [Source:SGD;Acc:S000001064]
H	YHR032C-A	YHR032C-A	2	-2.3	2	Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data; partially overlaps the dubious ORF YHR032W-A [Source:SGD;Acc:S000028646]
H	YHR035W	NEL1	23	-20.7	2	Putative protein of unknown function; not an essential gene [Source:SGD;Acc:S000001077]
H	YHR048W	YHK8	27	-25.4	2	Presumed antiporter of the DHA1 family of multidrug resistance transporters; contains 12 predicted transmembrane spans; expression of gene is up-regulated in cells exhibiting reduced susceptibility to azoles [Source:SGD;Acc:S000001090]
H	YHR049C-A	YHR049C-A	2	-2.1	2	Dubious open reading frame unlikely to encode a functional protein, based on available experimental and comparative sequence data [Source:SGD;Acc:S000003532]
H	YHR056W-A	YHR056W-A	10	-5.6	2	Dubious ORF unlikely to encode a functional protein, based on available experimental and comparative sequence data [Source:SGD;Acc:S000028777]
H	YHR070C-A	YHR070C-A	8	-2.4	2	Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data; overlaps the verified gene TRM5/YHR070W [Source:SGD;Acc:S000028780]
H	YHR071C-A	YHR071C-A	3	-2.5	2	Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data; partially overlaps the verified ORF ERG7/YHR072W [Source:SGD;Acc:S000028781]
H	YHR071W	PCL5	4	-118.8	2	Cyclin, interacts with and phosphorylated by Pho85p cyclin-dependent kinase (Cdk), induced by Gcn4p at level of transcription, specifically required for Gcn4p degradation, may be sensor of cellular protein biosynthetic capacity [Source:SGD;Acc:S000001113]
H	YHR093W	AHT1	4	-4.8	2	Dubious open reading frame, unlikely to encode a protein; not conserved in closely related Saccharomyces species; multicopy suppressor of glucose transport defects, likely due to the presence of an HXT4 regulatory element in the region [Source:SGD;Acc:S000001135]
H	YHR095W	YHR095W	55	-3.2	2	Dubious open reading frame unlikely to encode a functional protein, based on available experimental and comparative sequence data [Source:SGD;Acc:S000001137]
H	YHR124W	NDT80	33	-14.2	2	Meiosis-specific transcription factor required for exit from pachytene and for full meiotic recombination; activates middle sporulation genes; competes with Sum1p for binding to promoters containing middle sporulation elements (MSE) [Source:SGD;Acc:S000001166]
H	YHR137C-A	YHR137C-A	27	-2	2	Dubious ORF unlikely to encode a protein, based on available experimental and comparative sequence data; completely overlaps verified gene ARO9/YHR137W; identified by gene-trapping, expression analysis, and genome-wide homology searching [Source:SGD;Acc:S000028649]
H	YHR139C-A	YHR139C-A	11	-2.5	2	Dubious open reading frame unlikely to encode a functional protein, based on available experimental and comparative sequence data [Source:SGD;Acc:S000003533]
H	YHR157W	REC104	5	-2.8	2	Protein involved in early stages of meiotic recombination; required for meiotic crossing over; forms a complex with Rec102p and Spo11p necessary during the initiation of recombination [Source:SGD;Acc:S000001200]
H	YHR160C	PEX18	4	-6	2	Peroxin required for targeting of peroxisomal matrix proteins containing PTS2; interacts with Pex7p; partially redundant with Pex21p [Source:SGD;Acc:S000001203]
H	YHR175W	CTR2	7	-11.7	2	Putative low-affinity copper transporter of the vacuolar membrane; mutation confers resistance to toxic copper concentrations, while overexpression confers resistance to copper starvation [Source:SGD;Acc:S000001218]
H	YHR180W	YHR180W	2	-5.3	2	Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data [Source:SGD;Acc:S000001223]
H	YHR193C-A	YHR193C-A	13	-4.9	2	Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data; completely overlaps verified ORF MDM31 [Source:SGD;Acc:S000028785]
H	YHR210C	YHR210C	17	-15.1	2	Putative protein of unknown function; non-essential gene; highly expressed under anaeorbic conditions; sequence similarity to aldose 1-epimerases such as GAL10 [Source:SGD;Acc:S000001253]
H	YHR212C	YHR212C	5	-2.1	2	Dubious open reading frame unlikely to encode a functional protein, based on available experimental and comparative sequence data [Source:SGD;Acc:S000001255]
H	YHR213W-A	YHR213W-A	6	-11.1	2	Putative protein of unknown function; identified by gene-trapping, microarray-based expression analysis, and genome-wide homology searching [Source:SGD;Acc:S000028651]
H	YHR214C-E	YHR214C-E	1	-2.1	2	Putative protein of unknown function; identified by gene-trapping, microarray-based expression analysis, and genome-wide homology searching [Source:SGD;Acc:S000028654]
H	YHR214W-A	YHR214W-A	6	-2.1	2	Dubious open reading frame unlikely to encode a protein, based on experimental and comparative sequence data; similar to the fungal specific protein encoded by YAR068W; induced by zinc deficiency [Source:SGD;Acc:S000003535]
I	YIL009C-A	EST3	4	-4.3	2	Component of the telomerase holoenzyme, involved in telomere replication [Source:SGD;Acc:S000006432]
I	YIL021C-A	YIL021C-A	3	-2.4	2	Dubious ORF unlikely to encode a protein, based on available experimental and comparative sequence data; completely overlaps verified gene RPB3/YIL021W; identified by gene-trapping, expression analysis, and genome-wide homology searching [Source:SGD;Acc:S000028656]
I	YIL023C	YKE4	5	-19.7	2	Zinc transporter; localizes to the ER; null mutant is sensitive to calcofluor white, leads to zinc accumulation in cytosol; ortholog of the mouse KE4 and member of the ZIP (ZRT, IRT-like Protein) family [Source:SGD;Acc:S000001285]
I	YIL037C	PRM2	13	-11.4	2	Pheromone-regulated protein, predicted to have 4 transmembrane segments and a coiled coil domain; regulated by Ste12p; required for efficient nuclear fusion [Source:SGD;Acc:S000001299]
I	YIL047C-A	YIL047C-A	7	-5.2	2	Dubious open reading frame unlikely to encode a functional protein, based on available experimental and comparative sequence data [Source:SGD;Acc:S000028790]
I	YIL059C	YIL059C	8	-7.4	2	Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data; partially overlaps the uncharacterized ORF YIL060W [Source:SGD;Acc:S000001321]
I	YIL060W	YIL060W	12	-4.3	2	Putative protein of unknown function; mutant accumulates less glycogen than does wild type; null mutation results in a decrease in plasma membrane electron transport; YIL060W is not an essential gene [Source:SGD;Acc:S000001322]
I	YIL066W-A	YIL066W-A	5	-3.6	2	Dubious open reading frame unlikely to encode a functional protein, based on available experimental and comparative sequence data [Source:SGD;Acc:S000028791]
I	YIL068W-A	YIL068W-A	6	-3.1	2	Dubious open reading frame unlikely to encode a functional protein, based on available experimental and comparative sequence data [Source:SGD;Acc:S000028792]
I	YIL071W-A	YIL071W-A	1	-3.6	2	Dubious open reading frame unlikely to encode a functional protein, based on available experimental and comparative sequence data [Source:SGD;Acc:S000028793]
I	YIL073C	SPO22	21	-5.3	2	Meiosis-specific protein essential for chromosome synapsis, involved in completion of nuclear divisions during meiosis; induced early in meiosis [Source:SGD;Acc:S000001335]
I	YIL092W	YIL092W	18	-24.6	2	Putative protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm and to the nucleus [Source:SGD;Acc:S000001354]
I	YIL120W	QDR1	27	-14.8	2	Multidrug transporter of the major facilitator superfamily, required for resistance to quinidine, ketoconazole, fluconazole, and barban [Source:SGD;Acc:S000001382]
I	YIL134C-A	YIL134C-A	13	-10.7	2	Putative protein of unknown function; identified by fungal homology and RT-PCR [Source:SGD;Acc:S000028556]
I	YIL134W	FLX1	17	-52	2	Protein required for transport of flavin adenine dinucleotide (FAD), a synthesis product of riboflavin, across the mitochondrial membrane [Source:SGD;Acc:S000001396]
I	YIL139C	REV7	4	-16.1	2	Accessory subunit of DNA polymerase zeta, involved in translesion synthesis during post-replication repair; required for mutagenesis induced by DNA damage; involved in double-strand break repair [Source:SGD;Acc:S000001401]
I	YIL152W	YIL152W	4	-2.1	2	Putative protein of unknown function [Source:SGD;Acc:S000001414]
I	YIL163C	YIL163C	12	-2.1	2	Dubious open reading frame unlikely to encode a functional protein, based on available experimental and comparative sequence data [Source:SGD;Acc:S000001425]
I	YIL164C	NIT1	14	-21.2	2	Nitrilase, member of the nitrilase branch of the nitrilase superfamily; in closely related species and other S. cerevisiae strain backgrounds YIL164C and adjacent ORF, YIL165C, likely constitute a single ORF encoding a nitrilase gene [Source:SGD;Acc:S000001426]
I	YIL166C	YIL166C	15	-3.8	2	Putative protein with similarity to the allantoate permease (Dal5p) subfamily of the major facilitator superfamily; mRNA expression is elevated by sulfur limitation; YIL166C is a non-essential gene [Source:SGD;Acc:S000001428]
I	YIL171W-A	YIL171W-A	3	-2.1	2	Dubious open reading frame unlikely to encode a functional protein, based on available experimental and comparative sequence data [Source:SGD;Acc:S000028798]
I	YIR011C	STS1	15	-16.2	2	Protein required for localizing proteasomes to the nucleus; interacts with the karyopherin Srp1p; involved in ubiquitin-mediated protein degradation [Source:SGD;Acc:S000001450]
I	YIR013C	GAT4	5	-9	2	Protein containing GATA family zinc finger motifs [Source:SGD;Acc:S000001452]
I	YIR016W	YIR016W	9	-9.3	2	Putative protein of unknown function; expression directly regulated by the metabolic and meiotic transcriptional regulator Ume6p; overexpression causes a cell cycle delay or arrest; YIR016W is a non-essential gene [Source:SGD;Acc:S000001455]
I	YIR017W-A	YIR017W-A	2	-2.1	2	Dubious open reading frame unlikely to encode a functional protein, based on available experimental and comparative sequence data [Source:SGD;Acc:S000028799]
I	YIR018C-A	YIR018C-A	1	-2.5	2	Putative protein of unknown function; identified by expression profiling and mass spectrometry [Source:SGD;Acc:S000028837]
I	YIR019C	FLO11	20	-19.5	2	GPI-anchored cell surface glycoprotein (flocculin); required for pseudohyphal formation, invasive growth, flocculation, and biofilms; transcriptionally regulated by the MAPK pathway (via Ste12p and Tec1p) and the cAMP pathway (via Flo8p); required f   formation of fibrous interconnections between cells in a colony of a wild S. cerevisiae strain [Source:SGD;Acc:S000001458]
I	YIR020C	YIR020C	6	-2.8	2	Dubious open reading frame unlikely to encode a functional protein, based on available experimental and comparative sequence data [Source:SGD;Acc:S000001459]
I	YIR020C-B	YIR020C-B	2	-2.2	2	Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data; partially overlaps verified ORF MRS1 [Source:SGD;Acc:S000028800]
I	YIR020W-A	YIR020W-A	5	-8.6	2	Dubious open reading frame unlikely to encode a protein, based on experimental and comparative sequence data [Source:SGD;Acc:S000007241]
I	YIR021W-A	YIR021W-A	12	-3.2	2	Putative protein of unknown function; identified by expression profiling and mass spectrometry [Source:SGD;Acc:S000028838]
I	YIR028W	DAL4	19	-9.2	2	Allantoin permease; expression sensitive to nitrogen catabolite repression and induced by allophanate, an intermediate in allantoin degradation [Source:SGD;Acc:S000001467]
I	YIR030W-A	YIR030W-A	5	-3.4	2	Dubious open reading frame unlikely to encode a functional protein, based on available experimental and comparative sequence data [Source:SGD;Acc:S000028802]
I	YIR036W-A	YIR036W-A	5	-2.3	2	Dubious open reading frame unlikely to encode a functional protein, based on available experimental and comparative sequence data [Source:SGD;Acc:S000028803]
I	YIR040C	YIR040C	6	-3	2	Dubious open reading frame unlikely to encode a protein, based on experimental and comparative sequence data [Source:SGD;Acc:S000001479]
I	YIR041W	PAU15	12	-9.3	2	Protein of unknown function, member of the seripauperin multigene family encoded mainly in subtelomeric regions [Source:SGD;Acc:S000001480]
I	YIR042C	YIR042C	5	-2.1	2	Putative protein of unknown function; YIR042C is a non-essential gene [Source:SGD;Acc:S000001481]
J	YJL037W	IRC18	5	-2.9	2	Putative protein of unknown function; expression induced in respiratory-deficient cells and in carbon-limited chemostat cultures; similar to adjacent ORF, YJL038C; null mutant displays increased levels of spontaneous Rad52p foci [Source:SGD;Acc:S000003574]
J	YJL038C	LOH1	5	-3.3	2	Protein of unknown function with proposed roles in maintenance of genome integrity and also in spore wall assembly; induced during sporulation; repressed during vegetative growth by Sum1p and Hst1p; sequence similar to IRC1 [Source:SGD;Acc:S000003575]
J	YJL067W	YJL067W	2	-2.6	2	Dubious ORF unlikely to encode a functional protein, based on available experimental and comparative sequence data [Source:SGD;Acc:S000003603]
J	YJL077C	ICS3	7	-3	2	Protein of unknown function; may play a role in vacuolar sorting, null mutants are hypersensitive to sortin2 [Source:SGD;Acc:S000003613]
J	YJL093C	TOK1	13	-11.6	2	Outward-rectifier potassium channel of the plasma membrane with two pore domains in tandem, each of which forms a functional channel permeable to potassium; carboxy tail functions to prevent inner gate closures; target of K1 toxin [Source:SGD;Acc:S000003629]
J	YJL105W	SET4	14	-10.1	2	Protein of unknown function, contains a SET domain [Source:SGD;Acc:S000003641]
J	YJL107C	YJL107C	17	-13	2	Putative protein of unknown function; expression is induced by activation of the HOG1 mitogen-activated signaling pathway and this induction is Hog1p/Pbs2p dependent; YJL107C and adjacent ORF, YJL108C are merged in related fungi [Source:SGD;Acc:S000003643]
J	YJL114W	YJL114W	61	-4.2	2	Retrotransposon TYA Gag gene co-transcribed with TYB Pol; translated as TYA or TYA-TYB polyprotein; Gag is a nucleocapsid protein that is the structural constituent of virus-like particles (VLPs); similar to retroviral Gag [Source:SGD;Acc:S000003650]
J	YJL118W	YJL118W	6	-10	2	Putative protein of unknown function; may interact with ribosomes, based on co-purification experiments; YJL18W is a non-essential gene; deletion enhances the toxicity of heterologously expressed human alpha-synuclein [Source:SGD;Acc:S000003654]
J	YJL119C	YJL119C	6	-2.8	2	Dubious open reading frame unlikely to encode a functional protein, based on available experimental and comparative sequence data [Source:SGD;Acc:S000003655]
J	YJL120W	YJL120W	9	-3.1	2	Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data; partially overlaps the verified gene YJL121C/RPE1; deletion confers sensitivity to GSAO [Source:SGD;Acc:S000003656]
J	YJL127W-A	YJL127W-A	9	-2.3	2	Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data [Source:SGD;Acc:S000007612]
J	YJL135W	YJL135W	3	-10.9	2	Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data; partially overlaps the verified genes YJL134W/LCB3 [Source:SGD;Acc:S000003671]
J	YJL144W	YJL144W	3	-7.3	2	Cytoplasmic hydrophilin with a role in dessication resistance; expression induced by osmotic stress, starvation and during stationary phase; GFP-fusion protein is induced by the DNA-damaging agent MMS [Source:SGD;Acc:S000003680]
J	YJL163C	YJL163C	25	-24.8	2	Putative protein of unknown function [Source:SGD;Acc:S000003699]
J	YJL169W	YJL169W	4	-2.6	2	Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data; partially overlaps the verified gene YJL168C/SET2 [Source:SGD;Acc:S000003705]
J	YJL175W	YJL175W	2	-9.9	2	Dubious open reading frame unlikely to encode a functional protein; deletion confers resistance to cisplatin, hypersensitivity to 5-fluorouracil, and growth defect at high pH with high calcium; overlaps gene for SWI3 transcription factor [Source:SGD;Acc:S000003711]
J	YJL181W	YJL181W	16	-7.2	2	Putative protein of unknown function; expression is cell-cycle regulated as shown by microarray analysis; potential regulatory target of Mbp1p, which binds to the YJL181W promoter region [Source:SGD;Acc:S000003717]
J	YJL188C	BUD19	87	-4.3	2	Dubious open reading frame, unlikely to encode a protein; not conserved in closely related Saccharomyces species; 88% of ORF overlaps the verified gene RPL39; diploid mutant displays a weak budding pattern phenotype in a systematic assay [Source:SGD;Acc:S000003724]
J	YJL194W	CDC6	58	-17.8	2	Essential ATP-binding protein required for DNA replication, component of the pre-replicative complex (pre-RC) which requires ORC to associate with chromatin and is in turn required for Mcm2-7p DNA association; homologous to S. pombe Cdc18p [Source:SGD;Acc:S000003730]
J	YJL205C	NCE101	14	-22.2	2	Protein of unknown function, involved in secretion of proteins that lack classical secretory signal sequences [Source:SGD;Acc:S000003742]
J	YJL215C	YJL215C	2	-2.4	2	Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data [Source:SGD;Acc:S000003751]
J	YJL216C	IMA5	108	-140.6	2	Alpha-glucosidase with specificity for isomaltose, maltose, and palatinose; member of the IMA isomaltase family; not required for isomaltose utilization, but Ima5p overexpression allows the ima1 null mutant to grow on isomaltose [Source:SGD;Acc:S000003752]
J	YJL220W	YJL220W	3	-2.1	2	Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data; partially overlaps the verified gene YJL221C/FSP2 [Source:SGD;Acc:S000003756]
J	YJL222W-A	YJL222W-A	24	-14.8	2	Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data [Source:SGD;Acc:S000028663]
J	YJR005C-A	LSO1	4	-7	2	Putative protein of unknown function, originally identified as a syntenic homolog of an <i>Ashbya gossypii</i> gene [Source:SGD;Acc:S000028523]
J	YJR018W	YJR018W	7	-2.1	2	Dubious open reading frame unlikely to encode a functional protein, based on available experimental and comparative sequence data [Source:SGD;Acc:S000003779]
J	YJR020W	YJR020W	3	-2.2	2	Dubious open reading frame unlikely to encode a functional protein, based on available experimental and comparative sequence data [Source:SGD;Acc:S000003781]
J	YJR030C	YJR030C	16	-7.5	2	Putative protein of unknown function; expression repressed in carbon limited vs carbon replete chemostat cultures; YJR030C is a non-essential gene [Source:SGD;Acc:S000003791]
J	YJR036C	HUL4	42	-36.6	2	Protein with similarity to hect domain E3 ubiquitin-protein ligases, not essential for viability [Source:SGD;Acc:S000003797]
J	YJR038C	YJR038C	11	-2.7	2	Dubious open reading frame unlikely to encode a functional protein, based on available experimental and comparative sequence data [Source:SGD;Acc:S000003799]
J	YJR044C	VPS55	3	-11.7	2	Late endosomal protein involved in late endosome to vacuole trafficking; functional homolog of human obesity receptor gene-related protein (OB-RGRP) [Source:SGD;Acc:S000003805]
J	YJR056C	YJR056C	54	-23.2	2	Putative protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to both the cytoplasm and the nucleus [Source:SGD;Acc:S000003817]
J	YJR071W	YJR071W	17	-4.9	2	Dubious open reading frame unlikely to encode a functional protein, based on available experimental and comparative sequence data [Source:SGD;Acc:S000003832]
J	YJR087W	YJR087W	20	-5.1	2	Dubious open reading frame, unlikely to encode a protein; not conserved in closely related Saccharomyces species; partially overlaps the verified genes STE18 and ECM2 [Source:SGD;Acc:S000003847]
J	YJR094C	IME1	3	-3	2	Master regulator of meiosis that is active only during meiotic events, activates transcription of early meiotic genes through interaction with Ume6p, degraded by the 26S proteasome following phosphorylation by Ime2p [Source:SGD;Acc:S000003854]
J	YJR107W	YJR107W	18	-28.8	2	Putative protein of unknown function; has sequence or structural similarity to lipases [Source:SGD;Acc:S000003868]
J	YJR108W	ABM1	4	-2.4	2	Protein of unknown function, required for normal microtubule organization [Source:SGD;Acc:S000003869]
J	YJR112W-A	YJR112W-A	3	-18.8	2	Putative protein of unknown function; identified based on homology to <i>Ashbya gossypii</i> [Source:SGD;Acc:S000028513]
J	YJR115W	YJR115W	2	-2.3	2	Putative protein of unknown function [Source:SGD;Acc:S000003876]
J	YJR120W	YJR120W	2	-11.7	2	Protein of unknown function; essential for growth under anaerobic conditions; mutation causes decreased expression of ATP2, impaired respiration, defective sterol uptake, and altered levels/localization of ABC transporters Aus1p and Pdr11p [Source:SGD;Acc:S000003881]
J	YJR141W	YJR141W	12	-51	2	Essential protein of unknown function [Source:SGD;Acc:S000003902]
J	YJR146W	YJR146W	2	-2.3	2	Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data; partially overlaps the verified gene HMS2 [Source:SGD;Acc:S000003907]
J	YJR150C	DAN1	8	-4.7	2	Cell wall mannoprotein with similarity to Tir1p, Tir2p, Tir3p, and Tir4p; expressed under anaerobic conditions, completely repressed during aerobic growth [Source:SGD;Acc:S000003911]
J	YJR151C	DAN4	11	-11	2	Cell wall mannoprotein with similarity to Tir1p, Tir2p, Tir3p, and Tir4p; expressed under anaerobic conditions, completely repressed during aerobic growth [Source:SGD;Acc:S000003912]
J	YJR155W	AAD10	7	-3.2	2	Putative aryl-alcohol dehydrogenase; similar to P. chrysosporium aryl-alcohol dehydrogenase; mutational analysis has not yet revealed a physiological role [Source:SGD;Acc:S000003916]
J	YJR157W	YJR157W	4	-4.4	2	Dubious open reading frame unlikely to encode a functional protein, based on available experimental and comparative sequence data [Source:SGD;Acc:S000003918]
J	YJR158W	HXT16	234	-22.2	2	Protein of unknown function with similarity to hexose transporter family members, expression is repressed by high levels of glucose [Source:SGD;Acc:S000003919]
J	YJR160C	MPH3	18	-8.2	2	Alpha-glucoside permease, transports maltose, maltotriose, alpha-methylglucoside, and turanose; identical to Mph2p; encoded in a subtelomeric position in a region likely to have undergone duplication [Source:SGD;Acc:S000003921]
K	YKL036C	YKL036C	5	-9.1	2	Dubious open reading frame, unlikely to encode a protein; not conserved in closely related <i>Saccharomyces</i> species; partially overlaps the essential gene UGP1 gene and uncharacterized ORF YKL037W [Source:SGD;Acc:S000001519]
K	YKL044W	YKL044W	2	-3.6	2	Dubious open reading frame unlikely to encode a functional protein, based on available experimental and comparative sequence data [Source:SGD;Acc:S000001527]
K	YKL053W	YKL053W	8	-12.3	2	Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data; partially overlaps verified ORF ASK1 [Source:SGD;Acc:S000001536]
K	YKL066W	YKL066W	3	-2.3	2	Dubious open reading frame, unlikely to encode a protein; not conserved in closely related <i>Saccharomyces</i> species; partially overlaps the verified gene YNK1 [Source:SGD;Acc:S000001549]
K	YKL102C	YKL102C	3	-2.2	2	Dubious open reading frame unlikely to encode a functional protein; deletion confers sensitivity to citric acid; predicted protein would include a thiol-disulfide oxidoreductase active site [Source:SGD;Acc:S000001585]
K	YKL132C	RMA1	22	-24.9	2	Putative dihydrofolate synthetase; has similarity to Fol3p and to E. coli folylpolyglutamate synthetase/dihydrofolate synthetase; the authentic, non-tagged protein is detected in highly purified mitochondria in high-throughput studies [Source:SGD;Acc:S000001615]
K	YKL147C	YKL147C	9	-2.7	2	Dubious open reading frame, unlikely to encode a protein; not conserved in closely related Saccharomyces species; partially overlaps the verified gene AVT3 [Source:SGD;Acc:S000001630]
K	YKL169C	YKL169C	5	-3	2	Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data; partially overlaps the verified gene MRPL38 [Source:SGD;Acc:S000001652]
K	YKL202W	YKL202W	2	-2.7	2	Dubious open reading frame unlikely to encode a functional protein, based on available experimental and comparative sequence data [Source:SGD;Acc:S000001685]
K	YKL221W	MCH2	8	-4.2	2	Protein with similarity to mammalian monocarboxylate permeases, which are involved in transport of monocarboxylic acids across the plasma membrane; mutant is not deficient in monocarboxylate transport [Source:SGD;Acc:S000001704]
K	YKL222C	YKL222C	31	-5.2	2	Protein of unknown function that may interact with ribosomes, based on co-purification experiments; similar to transcriptional regulators from the zinc cluster (binuclear cluster) family; null mutant is sensitive to caffeine [Source:SGD;Acc:S000001705]
K	YKL223W	YKL223W	9	-3	2	Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data [Source:SGD;Acc:S000001706]
K	YKL224C	PAU16	5	-9.3	2	Protein of unknown function, member of the seripauperin multigene family encoded mainly in subtelomeric regions [Source:SGD;Acc:S000001707]
K	YKR005C	YKR005C	12	-11.9	2	Putative protein of unknown function [Source:SGD;Acc:S000001713]
K	YKR015C	YKR015C	22	-4.6	2	Putative protein of unknown function [Source:SGD;Acc:S000001723]
K	YKR033C	YKR033C	11	-8.1	2	Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data; partially overlaps the verified gene DAL80 [Source:SGD;Acc:S000001741]
K	YKR041W	YKR041W	23	-20.3	2	Protein of unknown function; localizes to the mitotic spindle; overexpression of YKR041W affects endocytic protein trafficking [Source:SGD;Acc:S000001749]
K	YKR047W	YKR047W	2	-2.2	2	Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data; partially overlaps the verified gene NAP1 [Source:SGD;Acc:S000001755]
K	YKR050W	TRK2	36	-8.7	2	Component of the Trk1p-Trk2p potassium transport system [Source:SGD;Acc:S000001758]
K	YKR053C	YSR3	31	-20.7	2	Dihydrosphingosine 1-phosphate phosphatase, membrane protein involved in sphingolipid metabolism; has similarity to Lcb3p [Source:SGD;Acc:S000001761]
K	YKR101W	SIR1	84	-85.1	2	Protein involved in repression of transcription at the silent mating-type loci HML and HMR; recruitment to silent chromatin requires interactions with Orc1p and with Sir4p, through a common Sir1p domain; binds to centromeric chromatin [Source:SGD;Acc:S000001809]
K	YKR103W	NFT1	40	-18.1	2	Putative transporter of the multidrug resistance-associated protein (MRP) subfamily; adjacent ORFs YKR103W and YKR104W are merged in different strain backgrounds. [Source:SGD;Acc:S000001811]
K	YKR105C	VBA5	12	-23.7	2	Putative transporter of the Major Facilitator Superfamily (MFS); proposed role as a basic amino acid permease based on phylogeny [Source:SGD;Acc:S000001813]
K	YKR106W	GEX2	12	-3.6	2	Proton:glutathione antiporter localized to the vacuolar and plasma membranes; expressed at a very low level; almost identical to paralog Gex1p; potential role in resistance to oxidative stress and modulation of the PKA pathway [Source:SGD;Acc:S000001814]
L	YLL005C	SPO75	16	-11.6	2	Meiosis-specific protein of unknown function, required for spore wall formation during sporulation; dispensable for both nuclear divisions during meiosis [Source:SGD;Acc:S000003928]
L	YLL019W-A	YLL019W-A	4	-8.9	2	Dubious open reading frame unlikely to encode a protein; completely overlaps the verified gene KNS1 [Source:SGD;Acc:S000028670]
L	YLL020C	YLL020C	5	-3.2	2	Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data; partially overlaps the verified gene KNS1 [Source:SGD;Acc:S000003943]
L	YLL025W	PAU17	6	-2.5	2	Protein of unknown function, member of the seripauperin multigene family encoded mainly in subtelomeric regions; YLL025W is not an essential gene [Source:SGD;Acc:S000003948]
L	YLL042C	ATG10	12	-27.1	2	Conserved E2-like conjugating enzyme that mediates formation of the Atg12p-Atg5p conjugate, which is a critical step in autophagy [Source:SGD;Acc:S000003965]
L	YLL046C	RNP1	66	-16.3	2	Ribonucleoprotein that contains two RNA recognition motifs (RRM) [Source:SGD;Acc:S000003969]
L	YLL049W	LDB18	6	-6.4	2	Component of the dynactin complex, which is required for dynein activity; null mutant exhibits defects in nuclear migration and spindle orientation and has reduced affinity for alcian blue dye; has homology to mammalian dynactin subunit p24 [Source:SGD;Acc:S000003972]
L	YLL059C	YLL059C	3	-2.5	2	Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data [Source:SGD;Acc:S000003982]
L	YLL063C	AYT1	15	-26.9	2	Acetyltransferase; catalyzes trichothecene 3-O-acetylation, suggesting a possible role in trichothecene biosynthesis [Source:SGD;Acc:S000003986]
L	YLR030W	YLR030W	4	-2.1	2	Putative protein of unknown function [Source:SGD;Acc:S000004020]
L	YLR031W	YLR031W	6	-2.7	2	Putative protein of unknown function [Source:SGD;Acc:S000004021]
L	YLR035C	MLH2	50	-36.3	2	Protein involved in the mismatch repair of certain frameshift intermediates and involved in meiotic recombination; forms a complex with Mlh1p [Source:SGD;Acc:S000004025]
L	YLR037C	PAU23	4	-9.3	2	Cell wall mannoprotein with similarity to Tir1p, Tir2p, Tir3p, and Tir4p; member of the seripauperin multigene family encoded mainly in subtelomeric regions; expressed under anaerobic conditions, completely repressed during aerobic growth [Source:SGD;Acc:S000004027]
L	YLR041W	YLR041W	3	-2.2	2	Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data; partially overlaps the uncharacterized ORF YLR040C [Source:SGD;Acc:S000004031]
L	YLR046C	YLR046C	5	-3.8	2	Putative membrane protein; member of the fungal lipid-translocating exporter (LTE) family of proteins; transcription is activated by paralogous transcription factors Yrm1p and Yrr1p along with genes involved in multidrug resistance [Source:SGD;Acc:S000004036]
L	YLR054C	OSW2	68	-7.8	2	Protein of unknown function proposed to be involved in the assembly of the spore wall [Source:SGD;Acc:S000004044]
L	YLR073C	RFU1	15	-19	2	Protein that inhibits Doa4p deubiquitinating activity; contributes to ubiquitin homeostasis by regulating the conversion of free ubiquitin chains to ubiquitin monomers by Doa4p; GFP-fusion protein localizes to endosomes [Source:SGD;Acc:S000004063]
L	YLR112W	YLR112W	4	-3.2	2	Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data [Source:SGD;Acc:S000004102]
L	YLR120W-A	YLR120W-A	3	-4.1	2	Dubious open reading frame unlikely to encode a protein, based on experimental and comparative sequence data; partially overlaps the verified ORF YLR121C [Source:SGD;Acc:S000028674]
L	YLR122C	YLR122C	2	-3.5	2	Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data; partially overlaps the dubious ORF YLR123C [Source:SGD;Acc:S000004112]
L	YLR125W	YLR125W	17	-19.2	2	Putative protein of unknown function; mutant has decreased Ty3 transposition; YLR125W is not an essential gene [Source:SGD;Acc:S000004115]
L	YLR154C-H	YLR154C-H	2	-2.4	2	Putative protein of unknown function identified by fungal homology comparisons and RT-PCR; this ORF partially overlaps RND5-2 [Source:SGD;Acc:S000028562]
L	YLR154W-B	YLR154W-B	2	-3.2	2	Dubious open reading frame unlikely to encode a protein; encoded within the the 25S rRNA gene on the opposite strand [Source:SGD;Acc:S000028563]
L	YLR154W-C	TAR1	6	-6.4	2	Mitochondrial protein potentially involved in regulation of respiratory metabolism; interacts genetically with RPO41 and physically with Coq5p; encoded within the 25S rRNA gene on the opposite strand [Source:SGD;Acc:S000028422]
L	YLR154W-F	YLR154W-F	4	-2.6	2	Dubious open reading frame unlikely to encode a protein; encoded within the the 35S rRNA gene on the opposite strand [Source:SGD;Acc:S000028843]
L	YLR156C-A	YLR156C-A	2	-2.4	2	Putative protein of unknown function identified by fungal homology comparisons and RT-PCR; this ORF partially overlaps RND5-3 [Source:SGD;Acc:S000028564]
L	YLR157C-C	YLR157C-C	2	-2.4	2	Putative protein of unknown function identified by fungal homology comparisons and RT-PCR; this ORF partially overlaps RND5-4 [Source:SGD;Acc:S000028565]
L	YLR157W-E	YLR157W-E	2	-2.3	2	Putative protein of unknown function identified by gene-trapping, microarray-based expression analysis, and genome-wide homology searching; partially overlaps a Ty1 element [Source:SGD;Acc:S000028678]
L	YLR159C-A	YLR159C-A	2	-2.4	2	Putative protein of unknown function identified by fungal homology comparisons and RT-PCR; this ORF partially overlaps RND5-5 [Source:SGD;Acc:S000028566]
L	YLR162W	YLR162W	18	-2.4	2	Putative protein of unknown function; overexpression confers resistance to the antimicrobial peptide MiAMP1 and causes growth arrest, apoptosis, and increased sensitivity to cobalt chloride [Source:SGD;Acc:S000004152]
L	YLR171W	YLR171W	8	-2.4	2	Dubious open reading frame unlikely to encode a functional protein, based on available experimental and comparative sequence data [Source:SGD;Acc:S000004161]
L	YLR202C	YLR202C	4	-2.5	2	Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data; partially overlaps the verified ORF YLR201C; ORF contains a putative intron [Source:SGD;Acc:S000004192]
L	YLR204W	QRI5	6	-2	2	Mitochondrial inner membrane protein, required for accumulation of spliced COX1 mRNA; may have an additional role in translation of COX1 mRNA [Source:SGD;Acc:S000004194]
L	YLR210W	CLB4	13	-21.7	2	B-type cyclin involved in cell cycle progression; activates Cdc28p to promote the G2/M transition; may be involved in DNA replication and spindle assembly; accumulates during S phase and G2, then targeted for ubiquitin-mediated degradation [Source:SGD;Acc:S000004200]
L	YLR213C	CRR1	16	-13.5	2	Putative glycoside hydrolase of the spore wall envelope; required for normal spore wall assembly, possibly for cross-linking between the glucan and chitosan layers; expressed during sporulation [Source:SGD;Acc:S000004203]
L	YLR227C	ADY4	16	-10.8	2	Structural component of the meiotic outer plaque, which is a membrane-organizing center that assembles on the cytoplasmic face of the spindle pole body during meiosis II and triggers the formation of the prospore membrane [Source:SGD;Acc:S000004217]
L	YLR234W	TOP3	42	-41.6	2	DNA Topoisomerase III, conserved protein that functions in a complex with Sgs1p and Rmi1p to relax single-stranded negatively-supercoiled DNA preferentially, involved in telomere stability and regulation of mitotic recombination [Source:SGD;Acc:S000004224]
L	YLR242C	ARV1	8	-31.5	2	Protein functioning in transport of glycosylphosphatidylinositol intermediates into ER lumen; required for normal intracellular sterol distribution; human ARV1 required for normal cholesterol and bile acid homeostasis; similar to Nup120p [Source:SGD;Acc:S000004232]
L	YLR246W	ERF2	9	-4.2	2	Subunit of a palmitoyltransferase, composed of Erf2p and Shr5p, that adds a palmitoyl lipid moiety to heterolipidated substrates such as Ras1p and Ras2p through a thioester linkage; mutants partially mislocalize Ras2p to the vacuole [Source:SGD;Acc:S000004236]
L	YLR255C	YLR255C	5	-3	2	Dubious ORF unlikely to encode a functional protein, based on available experimental and comparative sequence data [Source:SGD;Acc:S000004245]
L	YLR261C	VPS63	2	-2.3	2	Dubious open reading frame, unlikely to encode a protein; not conserved in closely related Saccharomyces species; 98% of ORF overlaps the verified gene YPT6; deletion causes a vacuolar protein sorting defect [Source:SGD;Acc:S000004251]
L	YLR263W	RED1	43	-31.8	2	Protein component of the synaptonemal complex axial elements, involved in chromosome segregation during the first meiotic division; critical for coupling checkpoint signaling to SC formation; interacts with Hop1p, Mec3p and Ddc1p [Source:SGD;Acc:S000004253]
L	YLR264C-A	YLR264C-A	4	-4.6	2	Putative protein of unknown function [Source:SGD;Acc:S000028808]
L	YLR266C	PDR8	18	-22	2	Transcription factor; targets include ATP-binding cassette (ABC) transporters, major facilitator superfamily transporters, and other genes involved in the pleiotropic drug resistance (PDR) phenomenon [Source:SGD;Acc:S000004256]
L	YLR269C	YLR269C	6	-3.2	2	Dubious open reading frame unlikely to encode a functional protein, based on available experimental and comparative sequence data [Source:SGD;Acc:S000004259]
L	YLR280C	YLR280C	7	-2.3	2	Dubious open reading frame unlikely to encode a functional protein, based on available experimental and comparative sequence data [Source:SGD;Acc:S000004270]
L	YLR302C	YLR302C	3	-2.2	2	Dubious open reading frame unlikely to encode a functional protein, based on available experimental and comparative sequence data [Source:SGD;Acc:S000004293]
L	YLR307W	CDA1	6	-10.1	2	Chitin deacetylase, together with Cda2p involved in the biosynthesis ascospore wall component, chitosan; required for proper rigidity of the ascospore wall [Source:SGD;Acc:S000004298]
L	YLR313C	SPH1	40	-73.5	2	Protein involved in shmoo formation and bipolar bud site selection; homologous to Spa2p, localizes to sites of polarized growth in a cell cycle dependent- and Spa2p-dependent manner, interacts with MAPKKs Mkk1p, Mkk2p, and Ste7p [Source:SGD;Acc:S000004305]
L	YLR318W	EST2	20	-11.2	2	Reverse transcriptase subunit of the telomerase holoenzyme, essential for telomerase core catalytic activity, involved in other aspects of telomerase assembly and function; mutations in human homolog are associated with aplastic anemia [Source:SGD;Acc:S000004310]
L	YLR320W	MMS22	38	-12.1	2	Protein that acts with Mms1p in a repair pathway that may be involved in resolving replication intermediates or preventing the damage caused by blocked replication forks; required for accurate meiotic chromosome segregation [Source:SGD;Acc:S000004312]
L	YLR329W	REC102	1	-2.4	2	Protein involved in early stages of meiotic recombination; required for chromosome synapsis; forms a complex with Rec104p and Spo11p necessary during the initiation of recombination [Source:SGD;Acc:S000004321]
L	YLR334C	YLR334C	5	-5.3	2	Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data; overlaps a stand-alone long terminal repeat sequence whose presence indicates a retrotransposition event occurred here [Source:SGD;Acc:S000004326]
L	YLR338W	OPI9	14	-19.3	2	Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data; partially overlaps the verified ORF VRP1/YLR337C [Source:SGD;Acc:S000004330]
L	YLR339C	YLR339C	12	-2.1	2	Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data; partially overlaps the essential gene RPP0 [Source:SGD;Acc:S000004331]
L	YLR341W	SPO77	8	-2.1	2	Meiosis-specific protein of unknown function, required for spore wall formation during sporulation; dispensable for both nuclear divisions during meiosis [Source:SGD;Acc:S000004333]
L	YLR343W	GAS2	27	-10.4	2	1,3-beta-glucanosyltransferase, involved with Gas4p in spore wall assembly; has similarity to Gas1p [Source:SGD;Acc:S000004335]
L	YLR346C	YLR346C	3	-10.2	2	Putative protein of unknown function found in mitochondria; expression is regulated by transcription factors involved in pleiotropic drug resistance, Pdr1p and Yrr1p; YLR346C is not an essential gene [Source:SGD;Acc:S000004338]
L	YLR349W	YLR349W	7	-5.3	2	Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data; overlaps the verified ORF DIC1/YLR348C [Source:SGD;Acc:S000004341]
L	YLR379W	YLR379W	4	-2.4	2	Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data; partially overlaps the essential ORF SEC61/YLR378C [Source:SGD;Acc:S000004371]
L	YLR394W	CST9	26	-101.8	2	SUMO E3 ligase; required for synaptonemal complex formation; localizes to synapsis initiation sites on meiotic chromosomes; potential Cdc28p substrate [Source:SGD;Acc:S000004386]
L	YLR399W-A	YLR399W-A	6	-2.3	2	Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data; overlaps the characterized ORF BDF1/YLR399C [Source:SGD;Acc:S000028682]
L	YLR400W	YLR400W	2	-3.3	2	Dubious open reading frame unlikely to encode a functional protein, based on available experimental and comparative sequence data [Source:SGD;Acc:S000004392]
L	YLR406C-A	YLR406C-A	2	-3.4	2	Putative protein of unknown function [Source:SGD;Acc:S000028683]
L	YLR415C	YLR415C	6	-2.2	2	Putative protein of unknown function; YLR415C is not an essential gene [Source:SGD;Acc:S000004407]
L	YLR416C	YLR416C	4	-2.4	2	Dubious open reading frame unlikely to encode a functional protein, based on available experimental and comparative sequence data [Source:SGD;Acc:S000004408]
L	YLR444C	YLR444C	2	-2.4	2	Dubious open reading frame unlikely to encode a functional protein, based on available experimental and comparative sequence data [Source:SGD;Acc:S000004436]
L	YLR445W	GMC2	11	-4.7	2	Putative protein of unknown function; transcription is regulated by Ume6p and induced in response to alpha factor [Source:SGD;Acc:S000004437]
L	YLR453C	RIF2	26	-38.8	2	Protein that binds to the Rap1p C-terminus and acts synergistically with Rif1p to help control telomere length and establish telomeric silencing; deletion results in telomere elongation [Source:SGD;Acc:S000004445]
L	YLR458W	YLR458W	2	-10.9	2	Dubious open reading frame unlikely to encode a functional protein, based on available experimental and comparative sequence data; overlaps 5' end of essential NBP1 gene required for mitosis [Source:SGD;Acc:S000004450]
L	YLR463C	YLR463C	9	-2.7	2	Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data; overlaps the uncharacterized ORFs YLR462W and YLR464W [Source:SGD;Acc:S000004455]
L	YLR465C	BSC3	2	-2.1	2	Dubious open reading frame, unlikely to encode a protein; not conserved in closely related Saccharomyces species; 100% of YLR465C overlaps the uncharacterized ORF YLR464W and 86% of YLR465C overlaps the verified gene YRF1-4 [Source:SGD;Acc:S000004457]
M	YML002W	YML002W	19	-11.2	2	Putative protein of unknown function; expression induced by heat and by calcium shortage [Source:SGD;Acc:S000004461]
M	YML003W	YML003W	17	-3	2	Putative protein of unknown function [Source:SGD;Acc:S000004462]
M	YML009C-A	YML009C-A	2	-2	2	Dubious open reading frame unlikely to encode a functional protein, based on available experimental and comparative sequence data [Source:SGD;Acc:S000004469]
M	YML009W-B	YML009W-B	12	-2.3	2	Dubious ORF unlikely to encode a functional protein, based on available experimental and comparative sequence data; deletion mutation confers an increase in Ty1 transposition [Source:SGD;Acc:S000004471]
M	YML012C-A	YML012C-A	4	-2.8	2	Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data; partially overlaps the verified gene SEL1 [Source:SGD;Acc:S000004474]
M	YML034C-A	YML034C-A	10	-2	2	Dubious ORF unlikely to encode a functional protein, based on available experimental and comparative sequence data [Source:SGD;Acc:S000004499]
M	YML043C	RRN11	21	-17.7	2	Component of the core factor (CF) rDNA transcription factor complex; CF is required for transcription of 35S rRNA genes by RNA polymerase I and is composed of Rrn6p, Rrn7p, and Rrn11p [Source:SGD;Acc:S000004507]
M	YML047C	PRM6	12	-2	2	Pheromone-regulated protein, predicted to have 2 transmembrane segments; regulated by Ste12p during mating [Source:SGD;Acc:S000004510]
M	YML053C	YML053C	4	-8	2	Putative protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm and the nucleus; overexpression causes a cell cycle delay or arrest; YML053C is not an essential gene [Source:SGD;Acc:S000004517]
M	YML054C-A	YML054C-A	6	-2.4	2	Putative protein of unknown function [Source:SGD;Acc:S000028573]
M	YML066C	SMA2	12	-4.6	2	Meiosis-specific prospore membrane protein; required to produce bending force necessary for proper assembly of the prospore membrane during sporulation [Source:SGD;Acc:S000004531]
M	YML083C	YML083C	14	-18.6	2	Putative protein of unknown function; transcriptionally regulated by Upc2p via an upstream sterol response element; strong increase in transcript abundance during anaerobic growth compared to aerobic growth; cells deleted for YML083C do not exhibit    defects in anerobic or anaerobic conditions [Source:SGD;Acc:S000004548]
M	YML087C	AIM33	10	-33.3	2	Putative protein of unknown function, highly conserved across species and orthologous to human CYB5R4; null mutant displays reduced frequency of mitochondrial genome loss [Source:SGD;Acc:S000004552]
M	YML090W	YML090W	1	-2.1	2	Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data; partially overlaps the dubious ORF YML089C; exhibits growth defect on a non-fermentable (respiratory) carbon source [Source:SGD;Acc:S000004555]
M	YML101C-A	YML101C-A	5	-2.2	2	Dubious open reading frame unlikely to encode a functional protein, based on available experimental and comparative sequence data [Source:SGD;Acc:S000004569]
M	YML133W-A	YML133W-A	14	-25.7	2	Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data; completely overlaps the uncharacterized ORF YML133C [Source:SGD;Acc:S000028689]
M	YMR007W	YMR007W	4	-2.7	2	Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data [Source:SGD;Acc:S000004609]
M	YMR013C-A	YMR013C-A	1	-2.6	2	Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data; completely overlaps the verified ORF SEC59/YML013C [Source:SGD;Acc:S000028847]
M	YMR017W	SPO20	14	-15.4	2	Meiosis-specific subunit of the t-SNARE complex, required for prospore membrane formation during sporulation; similar to but not functionally redundant with Sec9p; SNAP-25 homolog [Source:SGD;Acc:S000004619]
M	YMR018W	YMR018W	12	-11.4	2	Putative protein of unknown function with similarity to human PEX5Rp (peroxin protein 5 related protein); transcription increases during colony development similar to genes involved in peroxisome biogenesis; YMR018W is not an essential gene [Source:SGD;Acc:S000004620]
M	YMR031W-A	YMR031W-A	8	-3.2	2	Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data; null mutant displays shortened telomeres; partially overlaps the uncharacterized ORF YMR031C [Source:SGD;Acc:S000004634]
M	YMR052C-A	YMR052C-A	3	-2.1	2	Dubious open reading frame unlikely to encode a functional protein, based on available experimental and comparative sequence data [Source:SGD;Acc:S000004655]
M	YMR063W	RIM9	8	-6.3	2	Protein of unknown function, involved in the proteolytic activation of Rim101p in response to alkaline pH; has similarity to A. nidulans PalI; putative membrane protein [Source:SGD;Acc:S000004667]
M	YMR065W	KAR5	14	-21.9	2	Protein required for nuclear membrane fusion during karyogamy, localizes to the membrane with a soluble portion in the endoplasmic reticulum lumen, may form a complex with Jem1p and Kar2p; expression of the gene is regulated by pheromone [Source:SGD;Acc:S000004669]
M	YMR082C	YMR082C	7	-4.8	2	Dubious open reading frame unlikely to encode a functional protein, based on available experimental and comparative sequence data [Source:SGD;Acc:S000004687]
M	YMR084W	YMR084W	41	-10	2	Putative protein of unknown function; YMR084W and adjacent ORF YMR085W are merged in related strains [Source:SGD;Acc:S000004689]
M	YMR085W	YMR085W	14	-12.1	2	Putative protein of unknown function; YMR085W and adjacent ORF YMR084W are merged in related strains [Source:SGD;Acc:S000004690]
M	YMR086C-A	YMR086C-A	1	-5.2	2	Dubious open reading frame unlikely to encode a functional protein, based on available experimental and comparative sequence data [Source:SGD;Acc:S000004691]
M	YMR101C	SRT1	11	-24	2	Cis-prenyltransferase involved in synthesis of long-chain dolichols (19-22 isoprene units; as opposed to Rer2p which synthesizes shorter-chain dolichols); localizes to lipid bodies; transcription is induced during stationary phase [Source:SGD;Acc:S000004707]
M	YMR103C	YMR103C	9	-12.1	2	Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data [Source:SGD;Acc:S000004709]
M	YMR119W-A	YMR119W-A	9	-2.5	2	Dubious open reading frame unlikely to encode a functional protein, based on available experimental and comparative sequence data [Source:SGD;Acc:S000004726]
M	YMR122C	YMR122C	4	-2.5	2	Dubious open reading frame unlikely to encode a functional protein, based on available experimental and comparative sequence data [Source:SGD;Acc:S000004729]
M	YMR126C	DLT1	31	-58.2	2	Protein of unknown function, mutant sensitive to 6-azauracil (6AU) and mycophenolic acid (MPA) [Source:SGD;Acc:S000004733]
M	YMR133W	REC114	13	-8	2	Protein involved in early stages of meiotic recombination; possibly involved in the coordination of recombination and meiotic division; mutations lead to premature initiation of the first meiotic division [Source:SGD;Acc:S000004740]
M	YMR158C-A	YMR158C-A	2	-2.4	2	Putative protein of unknown function, may contain a lipid attachment site; YMR158C-A is not an essential gene [Source:SGD;Acc:S000007249]
M	YMR158W-B	YMR158W-B	3	-3.1	2	Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data; overlaps the verified gene ATG16/YMR159C [Source:SGD;Acc:S000004768]
M	YMR172C-A	YMR172C-A	2	-2.2	2	Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data [Source:SGD;Acc:S000004782]
M	YMR173W-A	YMR173W-A	198	-76.8	2	Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data; overlaps the verified gene DDR48/YML173W [Source:SGD;Acc:S000004785]
M	YMR179W	SPT21	66	-32.9	2	Protein with a role in transcriptional silencing; required for normal transcription at several loci including HTA2-HTB2 and HHF2-HHT2, but not required at the other histone loci; functionally related to Spt10p [Source:SGD;Acc:S000004791]
M	YMR187C	YMR187C	68	-49.7	2	Putative protein of unknown function; YMR187C is not an essential gene [Source:SGD;Acc:S000004799]
M	YMR191W	SPG5	18	-33.7	2	Protein required for survival at high temperature during stationary phase; not required for growth on nonfermentable carbon sources [Source:SGD;Acc:S000004803]
M	YMR194C-A	YMR194C-A	1	-2.3	2	Dubious open reading frame unlikely to encode a functional protein, based on available experimental and comparative sequence data [Source:SGD;Acc:S000007250]
M	YMR230W-A	YMR230W-A	18	-3.3	2	Putative protein of unknown function [Source:SGD;Acc:S000028576]
M	YMR232W	FUS2	37	-13.2	2	Cytoplasmic protein localized to the shmoo tip; required for the alignment of parental nuclei before nuclear fusion during mating [Source:SGD;Acc:S000004845]
M	YMR244W	YMR244W	11	-2.7	2	Putative protein of unknown function [Source:SGD;Acc:S000004858]
M	YMR245W	YMR245W	5	-2.3	2	Dubious open reading frame unlikely to encode a functional protein, based on available experimental and comparative sequence data [Source:SGD;Acc:S000004859]
M	YMR252C	YMR252C	5	-13.5	2	Putative protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to mitochondria; YMR252C is not an essential gene [Source:SGD;Acc:S000004865]
M	YMR257C	PET111	50	-117.5	2	Mitochondrial translational activator specific for the COX2 mRNA; located in the mitochondrial inner membrane [Source:SGD;Acc:S000004870]
M	YMR279C	YMR279C	2	-2.9	2	Putative boron transporter involved in boron efflux and resistance; overexpression mutant but not null mutant displays boron tolerance phenotype; identified as a heat-induced gene in a high-throughout screen; YMR279C is not an essential gene; paralo  he efflux pump ATR1 [Source:SGD;Acc:S000004892]
M	YMR304C-A	YMR304C-A	14	-6.4	2	Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data; partially overlaps the verified gene SCW10 [Source:SGD;Acc:S000004919]
M	YMR306C-A	YMR306C-A	10	-2	2	Dubious open reading frame unlikely to encode a functional protein, based on available experimental and comparative sequence data [Source:SGD;Acc:S000004922]
M	YMR307C-A	YMR307C-A	1	-2.2	2	Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data; completely overlaps the verified gene GAS1/YMR307W [Source:SGD;Acc:S000028578]
M	YMR315W-A	YMR315W-A	3	-4.3	2	Putative protein of unknown function [Source:SGD;Acc:S000028697]
M	YMR317W	YMR317W	19	-12.3	2	Putative protein of unknown function with some similarity to sialidase from Trypanosoma; YMR317W is not an essential gene [Source:SGD;Acc:S000004936]
M	YMR325W	PAU19	12	-9.3	2	Protein of unknown function, member of the seripauperin multigene family encoded mainly in subtelomeric regions [Source:SGD;Acc:S000004944]
N	YNL012W	SPO1	29	-10.2	2	Meiosis-specific prospore protein; required for meiotic spindle pole body duplication and separation; required to produce bending force necessary for proper prospore membrane assembly during sporulation; has similarity to phospholipase B [Source:SGD;Acc:S000004957]
N	YNL018C	YNL018C	11	-10.9	2	Putative protein of unknown function [Source:SGD;Acc:S000004963]
N	YNL019C	YNL019C	6	-2.8	2	Putative protein of unknown function [Source:SGD;Acc:S000004964]
N	YNL033W	YNL033W	6	-2.8	2	Putative protein of unknown function [Source:SGD;Acc:S000004978]
N	YNL034W	YNL034W	63	-9.1	2	Putative protein of unknown function; YNL034W is not an essential gene [Source:SGD;Acc:S000004979]
N	YNL042W-B	YNL042W-B	1	-2.3	2	Putative protein of unknown function [Source:SGD;Acc:S000028850]
N	YNL057W	YNL057W	6	-2.6	2	Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data [Source:SGD;Acc:S000005002]
N	YNL089C	YNL089C	5	-2.2	2	Dubious open reading frame unlikely to encode a functional protein; almost completely overlaps YNL090W/RHO2 which encodes a small GTPase of the Rho/Rac subfamily of Ras-like proteins [Source:SGD;Acc:S000005033]
N	YNL092W	YNL092W	47	-55.4	2	Putative S-adenosylmethionine-dependent methyltransferase of the seven beta-strand family; YNL092W is not an essential gene [Source:SGD;Acc:S000005036]
N	YNL120C	YNL120C	5	-4	2	Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data; deletion enhances replication of Brome mosaic virus in S. cerevisiae, but likely due to effects on the overlapping gene [Source:SGD;Acc:S000005064]
N	YNL130C-A	DGR1	2	-2.3	2	Protein of unknown function; dgr1 null mutant is resistant to 2-deoxy-D-glucose [Source:SGD;Acc:S000028579]
N	YNL140C	YNL140C	13	-2.6	2	Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data; partially overlaps the verified gene THO2/YNL139C [Source:SGD;Acc:S000005084]
N	YNL143C	YNL143C	12	-9.5	2	Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data [Source:SGD;Acc:S000005087]
N	YNL145W	MFA2	5	-5.3	2	Mating pheromone a-factor, made by a cells; interacts with alpha cells to induce cell cycle arrest and other responses leading to mating; biogenesis involves C-terminal modification, N-terminal proteolysis, and export; also encoded by MFA1 [Source:SGD;Acc:S000005089]
N	YNL146C-A	YNL146C-A	1	-2.5	2	Putative protein of unknown function [Source:SGD;Acc:S000028851]
N	YNL170W	YNL170W	8	-2.3	2	Dubious open reading frame unlikely to encode a functional protein, based on available experimental and comparative sequence data [Source:SGD;Acc:S000005114]
N	YNL184C	YNL184C	3	-12.3	2	Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data [Source:SGD;Acc:S000005128]
N	YNL196C	SLZ1	13	-3.1	2	Sporulation-specific protein with a leucine zipper motif [Source:SGD;Acc:S000005140]
N	YNL198C	YNL198C	1	-2.1	2	Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data [Source:SGD;Acc:S000005142]
N	YNL204C	SPS18	7	-8.5	2	Protein of unknown function, contains a putative zinc-binding domain; expressed during sporulation [Source:SGD;Acc:S000005148]
N	YNL210W	MER1	8	-13.9	2	Protein with RNA-binding motifs required for meiosis-specific mRNA splicing; required for chromosome pairing and meiotic recombination; Mer1p regulon embraces four essential meiotic pre-mRNAs: REC107, HFM1, AMA1 and SPO22 [Source:SGD;Acc:S000005154]
N	YNL226W	YNL226W	3	-4.1	2	Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data; overlaps the verified gene JJJ1/YNL227C [Source:SGD;Acc:S000005170]
N	YNL228W	YNL228W	6	-2.3	2	Dubious open reading frame unlikely to encode a functional protein, based on available experimental and comparative sequence data; almost completely overlaps ORF YNL227C/JJJ1 [Source:SGD;Acc:S000005172]
N	YNL235C	YNL235C	2	-2.5	2	Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data; partially overlaps the verified ORF SIN4/YNL236W, a subunit of the mediator complex [Source:SGD;Acc:S000005179]
N	YNL269W	BSC4	2	-2.4	2	Protein of unknown function, ORF exhibits genomic organization compatible with a translational readthrough-dependent mode of expression; readthrough is increased upon depletion of Sup35p [Source:SGD;Acc:S000005213]
N	YNL276C	YNL276C	4	-6.9	2	Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data; overlaps the verified gene MET2/YNL277W [Source:SGD;Acc:S000005220]
N	YNL277W-A	YNL277W-A	3	-2.1	2	Putative protein of unknown function [Source:SGD;Acc:S000028852]
N	YNL279W	PRM1	21	-3.1	2	Pheromone-regulated multispanning membrane protein involved in membrane fusion during mating; predicted to have 5 transmembrane segments and a coiled coil domain; localizes to the shmoo tip; regulated by Ste12p [Source:SGD;Acc:S000005223]
N	YNL300W	TOS6	3	-2.3	2	Glycosylphosphatidylinositol-dependent cell wall protein, expression is periodic and decreases in respone to ergosterol perturbation or upon entry into stationary phase; depletion increases resistance to lactic acid [Source:SGD;Acc:S000005244]
N	YNL318C	HXT14	14	-2	2	Protein with similarity to hexose transporter family members, expression is induced in low glucose and repressed in high glucose; the authentic, non-tagged protein is detected in highly purified mitochondria in high-throughput studies [Source:SGD;Acc:S000005262]
N	YNL322C	KRE1	1	-2.2	2	Cell wall glycoprotein involved in beta-glucan assembly; serves as a K1 killer toxin membrane receptor [Source:SGD;Acc:S000005266]
N	YNL331C	AAD14	21	-8.6	2	Putative aryl-alcohol dehydrogenase; similar to P. chrysosporium aryl-alcohol dehydrogenase; mutational analysis has not yet revealed a physiological role [Source:SGD;Acc:S000005275]
N	YNL339W-A	YNL339W-A	14	-25.7	2	Identified by gene-trapping, microarray-based expression analysis, and genome-wide homology searching [Source:SGD;Acc:S000028703]
N	YNR001W-A	YNR001W-A	9	-4	2	Dubious open reading frame unlikely to encode a functional protein; identified by homology [Source:SGD;Acc:S000007625]
N	YNR003W-A	YNR003W-A	6	-3.5	2	Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data; completely overlaps the verified gene RPC34/YNR003C [Source:SGD;Acc:S000028705]
N	YNR042W	YNR042W	4	-3.1	2	Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data; completely overlaps verified gene COQ2 [Source:SGD;Acc:S000005325]
N	YNR056C	BIO5	10	-92.6	2	Putative transmembrane protein involved in the biotin biosynthesis pathway; responsible for uptake of 7-keto 8-aminopelargonic acid; BIO5 is in a cluster of 3 genes (BIO3, BIO4, and BIO5) that mediate biotin synthesis [Source:SGD;Acc:S000005339]
N	YNR059W	MNT4	19	-57.1	2	Putative alpha-1,3-mannosyltransferase, not required for protein O-glycosylation [Source:SGD;Acc:S000005342]
N	YNR062C	YNR062C	12	-14.4	2	Putative membrane protein of unknown function [Source:SGD;Acc:S000005345]
N	YNR068C	YNR068C	11	-8.5	2	Putative protein of unknown function [Source:SGD;Acc:S000005351]
N	YNR072W	HXT17	234	-22.2	2	Hexose transporter, up-regulated in media containing raffinose and galactose at pH 7.7 versus pH 4.7, repressed by high levels of glucose [Source:SGD;Acc:S000005355]
N	YNR075C-A	YNR075C-A	11	-10.5	2	Identified by gene-trapping, microarray-based expression analysis, and genome-wide homology searching [Source:SGD;Acc:S000028706]
N	YNR075W	COS10	10	-20.4	2	Protein of unknown function, member of the DUP380 subfamily of conserved, often subtelomerically-encoded proteins [Source:SGD;Acc:S000005358]
O	YOL014W	YOL014W	4	-2.6	2	Putative protein of unknown function [Source:SGD;Acc:S000005374]
O	YOL015W	IRC10	17	-4	2	Putative protein of unknown function; null mutant displays increased levels of spontaneous Rad52p foci [Source:SGD;Acc:S000005375]
O	YOL029C	YOL029C	15	-2.6	2	Putative protein of unknown function; identified as interacting with Hsc82p and Hsp82p in high-throughput two-hybrid screens [Source:SGD;Acc:S000005389]
O	YOL047C	LDS2	8	-12.1	2	Protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm in a punctate pattern [Source:SGD;Acc:S000005407]
O	YOL048C	RRT8	24	-27.3	2	Putative protein of unknown function; identified in a screen for mutants with increased levels of rDNA transcription; green fluorescent protein (GFP)-fusion protein localizes to lipid particles [Source:SGD;Acc:S000005408]
O	YOL079W	YOL079W	1	-2.3	2	Dubious open reading frame unlikely to encode a functional protein, based on available experimental and comparative sequence data [Source:SGD;Acc:S000005439]
O	YOL085C	YOL085C	3	-2.4	2	Dubious open reading frame unlikely to encode a protein, based on experimental and comparative sequence data; partially overlaps the dubious gene YOL085W-A [Source:SGD;Acc:S000005445]
O	YOL091W	SPO21	45	-33.1	2	Component of the meiotic outer plaque of the spindle pole body, involved in modifying the meiotic outer plaque that is required prior to prospore membrane formation [Source:SGD;Acc:S000005451]
O	YOL104C	NDJ1	9	-2	2	Meiosis-specific telomere protein, required for bouquet formation, effective homolog pairing, ordered cross-over distribution, sister chromatid cohesion at meiotic telomeres, chromosomal segregation and telomere-led rapid prophase movement [Source:SGD;Acc:S000005464]
O	YOL105C	WSC3	9	-6.5	2	Partially redundant sensor-transducer of the stress-activated PKC1-MPK1 signaling pathway involved in maintenance of cell wall integrity; involved in the response to heat shock and other stressors; regulates 1,3-beta-glucan synthesis [Source:SGD;Acc:S000005465]
O	YOL110W	SHR5	36	-21.4	2	Subunit of a palmitoyltransferase, composed of Shr5p and Erf2p, that adds a palmitoyl lipid moiety to heterolipidated substrates such as Ras1p and Ras2p through a thioester linkage; palmitoylation is required for Ras2p membrane localization [Source:SGD;Acc:S000005470]
O	YOL132W	GAS4	14	-8.3	2	1,3-beta-glucanosyltransferase, involved with Gas2p in spore wall assembly; has similarity to Gas1p; localizes to the cell wall [Source:SGD;Acc:S000005492]
O	YOL162W	YOL162W	2	-2.1	2	Putative protein of unknown function; member of the Dal5p subfamily of the major facilitator family [Source:SGD;Acc:S000005522]
O	YOR008C-A	YOR008C-A	2	-4	2	Putative protein of unknown function, includes a potential transmembrane domain; deletion results in slightly lengthened telomeres [Source:SGD;Acc:S000006431]
O	YOR010C	TIR2	6	-5.7	2	Putative cell wall mannoprotein of the Srp1p/Tip1p family of serine-alanine-rich proteins; transcription is induced by cold shock and anaerobiosis [Source:SGD;Acc:S000005536]
O	YOR013W	IRC11	9	-2.4	2	Dubious opening reading frame unlikely to encode a protein, based on available experimental and comparative sequence data; partially overlaps the uncharacterized gene YOR012C; null mutant displays increased levels of spontaneous Rad52 foci [Source:SGD;Acc:S000005539]
O	YOR019W	YOR019W	78	-79.3	2	Protein of unknown function that may interact with ribosomes, based on co-purification experiments [Source:SGD;Acc:S000005545]
O	YOR044W	IRC23	7	-37.6	2	Putative protein of unknown function; green fluorescent protein (GFP)-fusion localizes to the ER; null mutant displays increased levels of spontaneous Rad52p foci [Source:SGD;Acc:S000005570]
O	YOR050C	YOR050C	2	-2.1	2	Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data; null mutation is viable [Source:SGD;Acc:S000005576]
O	YOR053W	YOR053W	5	-2.2	2	Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data; partially overlaps the verified gene VHS3/YOR054C [Source:SGD;Acc:S000005579]
O	YOR062C	YOR062C	11	-11.3	2	Protein of unknown function; similar to YKR075Cp and Reg1p; expression regulated by glucose and Rgt1p; GFP-fusion protein is induced in response to the DNA-damaging agent MMS [Source:SGD;Acc:S000005588]
O	YOR072W-A	YOR072W-A	2	-2	2	Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data; partially overlaps the uncharacterized ORF YOR072W; originally identified by fungal homology and RT-PCR [Source:SGD;Acc:S000028582]
O	YOR072W-B	YOR072W-B	1	-2.5	2	Putative protein of unknown function; identified by expression profiling and mass spectrometry [Source:SGD;Acc:S000028516]
O	YOR073W-A	YOR073W-A	2	-3.2	2	Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data; partially/completely overlaps the verified ORF CDC21/YOR074C; identified by RT-PCR [Source:SGD;Acc:S000028583]
O	YOR102W	YOR102W	2	-2.3	2	Dubious open reading frame, unlikely to encode a functional protein; extensively overlaps essential OST2 gene encoding a subunit of the ER lumen oligosaccharyltransferase complex [Source:SGD;Acc:S000005628]
O	YOR105W	YOR105W	4	-2.5	2	Dubious open reading frame unlikely to encode a functional protein, based on available experimental and comparative sequence data [Source:SGD;Acc:S000005631]
O	YOR107W	RGS2	14	-16	2	Negative regulator of glucose-induced cAMP signaling; directly activates the GTPase activity of the heterotrimeric G protein alpha subunit Gpa2p [Source:SGD;Acc:S000005633]
O	YOR114W	YOR114W	12	-5.8	2	Putative protein of unknown function; null mutant is viable [Source:SGD;Acc:S000005640]
O	YOR146W	YOR146W	3	-2.9	2	Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data; open reading frame overlaps the verified gene PNO1/YOR145C [Source:SGD;Acc:S000005672]
O	YOR161W-B	YOR161W-B	3	-2.1	2	Identified by gene-trapping, microarray-based expression analysis, and genome-wide homology searching [Source:SGD;Acc:S000028714]
O	YOR169C	YOR169C	5	-2.1	2	Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data; open reading frame overlaps the verified gene GLN4/YOR168W [Source:SGD;Acc:S000005695]
O	YOR170W	YOR170W	4	-2.3	2	Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data; partially overlaps the verified gene LCB4 [Source:SGD;Acc:S000005696]
O	YOR186W	YOR186W	7	-24	2	Putative protein of unknown function; proper regulation of expression during heat stress is sphingolipid-dependent [Source:SGD;Acc:S000005712]
O	YOR203W	YOR203W	2	-2.1	2	Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data; overlaps 5' end of essential DED1 gene required for translation initiation [Source:SGD;Acc:S000005729]
O	YOR214C	SPR2	5	-2.7	2	Putative protein of unknown function; YOR214C is not an essential gene [Source:SGD;Acc:S000005740]
O	YOR225W	YOR225W	7	-4.1	2	Dubious open reading frame unlikely to encode a functional protein, based on available experimental and comparative sequence data [Source:SGD;Acc:S000005751]
O	YOR231C-A	YOR231C-A	7	-3.2	2	Identified by gene-trapping, microarray-based expression analysis, and genome-wide homology searching [Source:SGD;Acc:S000028716]
O	YOR242C	SSP2	10	-2.3	2	Sporulation specific protein that localizes to the spore wall; required for sporulation at a point after meiosis II and during spore wall formation; SSP2 expression is induced midway in meiosis [Source:SGD;Acc:S000005768]
O	YOR248W	YOR248W	2	-3.4	2	Dubious open reading frame unlikely to encode a functional protein, based on available experimental and comparative sequence data [Source:SGD;Acc:S000005774]
O	YOR255W	OSW1	4	-5.1	2	Protein involved in sporulation; required for the construction of the outer spore wall layers; required for proper localization of Spo14p [Source:SGD;Acc:S000005781]
O	YOR263C	YOR263C	4	-3.8	2	Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data; partially overlaps the verified ORF DES3/YOR264W [Source:SGD;Acc:S000005789]
O	YOR292C	YOR292C	3	-5	2	Putative protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to the vacuole; YOR292C is not an essential gene [Source:SGD;Acc:S000005818]
O	YOR293C-A	YOR293C-A	6	-3.6	2	Putative protein of unknown function; identified by expression profiling and mass spectrometry [Source:SGD;Acc:S000028858]
O	YOR298W	MUM3	33	-16.2	2	Protein of unknown function involved in the organization of the outer spore wall layers; has similarity to the tafazzins superfamily of acyltransferases [Source:SGD;Acc:S000005824]
O	YOR300W	YOR300W	1	-2.5	2	Dubious open reading frame, unlikely to encode a protein; overlaps with verified gene BUD7/YOR299W; mutation affects bipolar budding and bud site selection, though phenotype could be due to the mutation's effects on BUD7 [Source:SGD;Acc:S000005826]
O	YOR309C	YOR309C	18	-27.8	2	Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data; partially overlaps the verified gene NOP58 [Source:SGD;Acc:S000005836]
O	YOR313C	SPS4	9	-12.2	2	Protein whose expression is induced during sporulation; not required for sporulation; heterologous expression in E. coli induces the SOS response that senses DNA damage [Source:SGD;Acc:S000005840]
O	YOR316C-A	YOR316C-A	9	-2.5	2	Putative protein of unknown function; identified by fungal homology and RT-PCR [Source:SGD;Acc:S000028584]
O	YOR325W	YOR325W	2	-2.1	2	Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data; completely overlaps the verified ORF FRT1 [Source:SGD;Acc:S000005852]
O	YOR329W-A	YOR329W-A	4	-8.7	2	Dubious open reading frame unlikely to encode a functional protein; identified by fungal homology and RT-PCR [Source:SGD;Acc:S000028585]
O	YOR331C	YOR331C	6	-2	2	Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data; open reading frame overlaps the verified gene VMA4/YOR332W [Source:SGD;Acc:S000005858]
O	YOR333C	YOR333C	5	-3.1	2	Dubious open reading frame, unlikely to encode a functional protein; overlaps 5' end of MRS2 gene required for respiratory growth [Source:SGD;Acc:S000005860]
O	YOR339C	UBC11	13	-4.8	2	Ubiquitin-conjugating enzyme most similar in sequence to Xenopus ubiquitin-conjugating enzyme E2-C, but not a true functional homolog of this E2; unlike E2-C, not required for the degradation of mitotic cyclin Clb2 [Source:SGD;Acc:S000005866]
O	YOR343C	YOR343C	7	-15.2	2	Dubious open reading frame unlikely to encode a functional protein, based on available experimental and comparative sequence data [Source:SGD;Acc:S000005870]
O	YOR345C	YOR345C	2	-2.3	2	Dubious ORF unlikely to encode a protein, based on available experimental and comparative sequence data; overlaps the verified gene REV1; null mutant displays increased resistance to antifungal agents gliotoxin, cycloheximide and H2O2 [Source:SGD;Acc:S000005872]
O	YOR364W	YOR364W	1	-2.4	2	Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data; partially overlaps the uncharacterized ORF YOR365C [Source:SGD;Acc:S000005891]
O	YOR365C	YOR365C	37	-12.6	2	Putative protein of unknown function; YOR365C is not an essential protein [Source:SGD;Acc:S000005892]
O	YOR366W	YOR366W	15	-12.8	2	Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data; partially overlaps the uncharacterized ORF YOR365C [Source:SGD;Acc:S000005893]
O	YOR376W	YOR376W	9	-3.6	2	Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data; YOR376W is not an essential gene. [Source:SGD;Acc:S000005903]
O	YOR378W	AMF1	13	-10.7	2	Putative paralog of ATR1, but not required for boron tolerance; member of the DHA2 family of drug:H+ antiporters; YOR378W is not an essential gene [Source:SGD;Acc:S000005905]
O	YOR379C	YOR379C	3	-3.1	2	Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data; partially overlaps the uncharacterized ORF YOR378W [Source:SGD;Acc:S000005906]
O	YOR381W-A	YOR381W-A	23	-5.1	2	Putative protein of unknown function; identified by fungal homology and RT-PCR [Source:SGD;Acc:S000028587]
O	YOR383C	FIT3	3	-2.6	2	Mannoprotein that is incorporated into the cell wall via a glycosylphosphatidylinositol (GPI) anchor, involved in the retention of siderophore-iron in the cell wall [Source:SGD;Acc:S000005910]
O	YOR392W	YOR392W	1	-4.7	2	Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data; gene expression induced by heat [Source:SGD;Acc:S000005919]
O	YOR394W	PAU21	17	-2.3	2	Protein of unknown function, member of the seripauperin multigene family encoded mainly in subtelomeric regions; identical to Pau22p; encodes 2 proteins that are translated from 2 different start codons [Source:SGD;Acc:S000005921]
P	YPL021W	ECM23	7	-2.2	2	Non-essential protein of unconfirmed function; affects pre-rRNA processing, may act as a negative regulator of the transcription of genes involved in pseudohyphal growth; homologous to Srd1p [Source:SGD;Acc:S000005942]
P	YPL025C	YPL025C	5	-2.3	2	Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data [Source:SGD;Acc:S000005946]
P	YPL027W	SMA1	5	-3.4	2	Protein of unknown function involved in the assembly of the prospore membrane during sporulation; interacts with Spo14p [Source:SGD;Acc:S000005948]
P	YPL033C	SRL4	4	-2.6	2	Protein of unknown function; involved in regulation of dNTP production; null mutant suppresses the lethality of lcd1 and rad53 mutations; expression is induced by Kar4p [Source:SGD;Acc:S000005954]
P	YPL039W	YPL039W	33	-7.8	2	Putative protein of unknown function; YPL039W is not an essential gene [Source:SGD;Acc:S000005960]
P	YPL041C	YPL041C	18	-19.8	2	Protein of unknown function involved in maintenance of proper telomere length [Source:SGD;Acc:S000005962]
P	YPL044C	YPL044C	3	-6	2	Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data; partially overlaps the verified gene NOP4/YPL043W [Source:SGD;Acc:S000005965]
P	YPL062W	YPL062W	8	-2.2	2	Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data; YPL062W is not an essential gene; homozygous diploid mutant shows a decrease in glycogen accumulation [Source:SGD;Acc:S000005983]
P	YPL068C	YPL068C	45	-21.6	2	Protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to the nucleus and is induced in response to the DNA-damaging agent MMS [Source:SGD;Acc:S000005989]
P	YPL073C	YPL073C	4	-4.3	2	Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data; completely overlaps with verified gene UBP16/YPL072W; may interact with ribosome based on co-purification experiments [Source:SGD;Acc:S000005994]
P	YPL080C	YPL080C	2	-2.2	2	Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data [Source:SGD;Acc:S000006001]
P	YPL119C-A	YPL119C-A	2	-2.2	2	Putative protein of unknown function; identified by expression profiling and mass spectrometry [Source:SGD;Acc:S000028859]
P	YPL121C	MEI5	68	-13	2	Meiosis specific protein involved in DMC1-dependent meiotic recombination, forms heterodimer with Sae3p; proposed to be an assembly factor for Dmc1p [Source:SGD;Acc:S000006042]
P	YPL130W	SPO19	2	-4.6	2	Meiosis-specific prospore protein; required to produce bending force necessary for proper assembly of the prospore membrane during sporulation; identified as a weak high-copy suppressor of the spo1-1 ts mutation [Source:SGD;Acc:S000006051]
P	YPL136W	YPL136W	11	-5.4	2	Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data; completely overlaps the verified gene GIP3/YPL137C [Source:SGD;Acc:S000006057]
P	YPL163C	SVS1	3	-13	2	Cell wall and vacuolar protein, required for wild-type resistance to vanadate [Source:SGD;Acc:S000006084]
P	YPL165C	SET6	10	-2.3	2	SET domain protein of unknown function; deletion heterozygote is sensitive to compounds that target ergosterol biosynthesis, may be involved in compound availability [Source:SGD;Acc:S000006086]
P	YPL167C	REV3	81	-32.7	2	Catalytic subunit of DNA polymerase zeta, involved in translesion synthesis during post-replication repair; required for mutagenesis induced by DNA damage; involved in double-strand break repair [Source:SGD;Acc:S000006088]
P	YPL174C	NIP100	26	-44.4	2	Large subunit of the dynactin complex, which is involved in partitioning the mitotic spindle between mother and daughter cells; putative ortholog of mammalian p150(glued) [Source:SGD;Acc:S000006095]
P	YPL197C	YPL197C	3	-2.2	2	Dubious open reading frame unlikely to encode a protein, based on experimental and comparative sequence data; partially overlaps the ribosomal gene RPB7B [Source:SGD;Acc:S000006118]
P	YPL200W	CSM4	4	-2.4	2	Protein required for accurate chromosome segregation during meiosis; involved in meiotic telomere clustering (bouquet formation) and telomere-led rapid prophase movements [Source:SGD;Acc:S000006121]
P	YPL201C	YIG1	11	-24.6	2	Protein that interacts with glycerol 3-phosphatase and plays a role in anaerobic glycerol production; localizes to the nucleus and cytosol [Source:SGD;Acc:S000006122]
P	YPL216W	YPL216W	52	-19.1	2	Putative protein of unknown function; YPL216W is not an essential gene [Source:SGD;Acc:S000006137]
P	YPL250C	ICY2	43	-15.4	2	Protein of unknown function; mobilized into polysomes upon a shift from a fermentable to nonfermentable carbon source; potential Cdc28p substrate [Source:SGD;Acc:S000006171]
P	YPL250W-A	YPL250W-A	4	-5.6	2	Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data; almost completely overlaps the verified ORF RPL36B/YPL249C-A; identified by fungal homology and RT-PCR [Source:SGD;Acc:S000028589]
P	YPL257W	YPL257W	6	-9.2	2	Putative protein of unknown function; homozygous diploid deletion strain exhibits low budding index; physically interacts with Hsp82p; YPL257W is not an essential gene [Source:SGD;Acc:S000006178]
P	YPL261C	YPL261C	5	-2.6	2	Dubious open reading frame unlikely to encode a protein; partially overlaps the uncharacterized ORF YPL260W [Source:SGD;Acc:S000006182]
P	YPL278C	YPL278C	7	-14.1	2	Putative protein of unknown function; gene expression regulated by copper levels [Source:SGD;Acc:S000006199]
P	YPL282C	PAU22	17	-2.3	2	Protein of unknown function, member of the seripauperin multigene family encoded mainly in subtelomeric regions; identical to Pau21p; encodes 2 proteins that are translated from 2 different start codons [Source:SGD;Acc:S000006203]
P	YPL283W-A	YPL283W-A	14	-25.7	2	Identified by gene-trapping, microarray-based expression analysis, and genome-wide homology searching [Source:SGD;Acc:S000028723]
P	YPR007C	REC8	29	-20.5	2	Meiosis-specific component of sister chromatid cohesion complex; maintains cohesion between sister chromatids during meiosis I; maintains cohesion between centromeres of sister chromatids until meiosis II; homolog of S. pombe Rec8p [Source:SGD;Acc:S000006211]
P	YPR027C	YPR027C	8	-2.4	2	Putative protein of unknown function [Source:SGD;Acc:S000006231]
P	YPR039W	YPR039W	3	-14.2	2	Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data; partially overlaps the verified non essential genes ERV2/YPR037C and TIP41/YPR040W [Source:SGD;Acc:S000006243]
P	YPR050C	YPR050C	1	-2.6	2	Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data; partially overlaps the verified gene MAK3/YPR051W [Source:SGD;Acc:S000006254]
P	YPR053C	YPR053C	1	-3	2	Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data; partially overlaps verified gene NHP6A/YPR052C [Source:SGD;Acc:S000006257]
P	YPR059C	YPR059C	7	-2.3	2	Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data; partially overlaps the verified gene YMC1/YPR058W [Source:SGD;Acc:S000006263]
P	YPR074W-A	YPR074W-A	2	-2.3	2	Hypothetical protein identified by homology [Source:SGD;Acc:S000007631]
P	YPR077C	YPR077C	6	-12.1	2	Dubious open reading frame unlikely to encode a functional protein, based on available experimental and comparative sequence data; expression increased by deletion of NAP1 [Source:SGD;Acc:S000006281]
P	YPR078C	YPR078C	13	-15.1	2	Putative protein of unknown function; possible role in DNA metabolism and/or in genome stability; expression is heat-inducible [Source:SGD;Acc:S000006282]
P	YPR108W-A	YPR108W-A	7	-2	2	Putative protein of unknown function; identified by fungal homology and RT-PCR [Source:SGD;Acc:S000028590]
P	YPR121W	THI22	135	-28.7	2	Protein with similarity to hydroxymethylpyrimidine phosphate kinases; member of a gene family with THI20 and THI21; not required for thiamine biosynthesis [Source:SGD;Acc:S000006325]
P	YPR142C	YPR142C	7	-2.1	2	Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data; partially overlaps the verified ORF RRP15, which is required for ribosomal RNA processing [Source:SGD;Acc:S000006346]
P	YPR145C-A	YPR145C-A	1	-2.2	2	Putative protein of unknown function [Source:SGD;Acc:S000113589]
P	YPR151C	SUE1	7	-43.5	2	Mitochondrial protein required for degradation of unstable forms of cytochrome c [Source:SGD;Acc:S000006355]
P	YPR157W	TDA6	11	-5.6	2	Putative protein of unknown function; induced by treatment with 8-methoxypsoralen and UVA irradiation; null mutant is sensitive to expression of the top1-T722A allele [Source:SGD;Acc:S000006361]
P	YPR158W	CUR1	8	-22.8	2	Protein of unknown function involved in destabilization of [URE3] prions; similar in sequence to Btn2p [Source:SGD;Acc:S000006362]
P	YPR159C-A	YPR159C-A	1	-3.1	2	Identified by gene-trapping, microarray-based expression analysis, and genome-wide homology searching [Source:SGD;Acc:S000028725]
P	YPR160W-A	YPR160W-A	2	-2.3	2	Dubious open reading frame unlikely to encode a functional protein, based on available experimental and comparative sequence data; identified by expression profiling and mass spectrometry [Source:SGD;Acc:S000028860]
P	YPR177C	YPR177C	17	-2.1	2	Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data; partially overlaps the 5' end of the essential PRP4 gene encoding a component of the U4/U6-U5 snRNP complex [Source:SGD;Acc:S000006381]
P	YPR192W	AQY1	29	-16.6	2	Spore-specific water channel that mediates the transport of water across cell membranes, developmentally controlled; may play a role in spore maturation, probably by allowing water outflow, may be involved in freeze tolerance [Source:SGD;Acc:S000006396]
P	YPR194C	OPT2	21	-21.2	2	Oligopeptide transporter; member of the OPT family, with potential orthologs in S. pombe and C. albicans; also plays a role in formation of mature vacuoles [Source:SGD;Acc:S000006398]
P	YPR195C	YPR195C	6	-2.3	2	Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data [Source:SGD;Acc:S000006399]
P	YPR196W	YPR196W	15	-48.3	2	Putative maltose activator [Source:SGD;Acc:S000006400]
P	YPR197C	YPR197C	18	-2.9	2	Dubious open reading frame unlikely to encode a functional protein, based on available experimental and comparative sequence data [Source:SGD;Acc:S000006401]
P	YPR199C	ARR1	8	-20.2	2	Transcriptional activator of the basic leucine zipper (bZIP) family, required for transcription of genes involved in resistance to arsenic compounds [Source:SGD;Acc:S000006403]
Q	Q0060	AI3	19	-57.8	2	Endonuclease I-SceIII, encoded by a mobile group I intron within the mitochondrial COX1 gene [Source:SGD;Acc:S000007263]
Q	Q0075	AI5_BETA	11	-3.6	2	Protein of unknown function, encoded within an intron of the mitochondrial COX1 gene; translational initiation codon is predicted to be ATA rather than ATG [Source:SGD;Acc:S000007266]
Q	Q0255	Q0255	10	-99.2	2	Maturase-like protein [Source:SGD;Acc:S000007282]
Q	Q0297	Q0297	5	-2.5	2	Dubious open reading frame of the mitochondrial genome; unlikely to encode a protein, based on available experimental and comparative sequence data; partially overlaps the verified gene RPM1 [Source:SGD;Acc:S000007284]